Factsheet for Bra029001.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
peroxisome 1
plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43020	Canola	cytoskeleton, cytosol, peroxisome	97.32	97.32
AT5G54940.3	Thale cress	cytosol, nucleus, peroxisome	89.29	89.29
VIT_19s0090g00420.t01	Wine grape	cytosol, nucleus, peroxisome	83.04	83.04
Solyc07g064620.1.1	Tomato	cytosol	81.25	81.25
KRH14395	Soybean	cytosol	78.57	77.19
KRH73751	Soybean	cytosol	77.68	76.32
CDY52575	Canola	cytosol, peroxisome	97.32	68.99
PGSC0003DMT400057195	Potato	cytosol	80.36	62.94
Bra026376.1-P	Field mustard	cytosol, peroxisome, plastid	61.61	61.06
KRH46184	Soybean	vacuole	84.82	60.51
Bra010410.1-P	Field mustard	cytosol, peroxisome, plastid	60.71	60.18
Bra019068.1-P	Field mustard	cytosol, peroxisome, plastid	59.82	59.29
Bra014363.1-P	Field mustard	cytosol, peroxisome, plastid	59.82	58.26
Bra030890.1-P	Field mustard	cytosol, peroxisome, plastid	59.82	58.26
KRG98759	Soybean	cytosol	67.86	53.9
PGSC0003DMT400091273	Potato	cytosol	63.39	53.79
Solyc10g006280.1.1	Tomato	cytosol	58.04	52.85
HORVU4Hr1G010890.1	Barley	cytosol, peroxisome	27.68	52.54
Os02t0151501-00	Rice	cytosol, peroxisome	24.11	47.37
Bra002944.1-P	Field mustard	cytosol	92.86	44.83
Zm00001d004854_P001	Maize	extracellular	26.79	42.25
Bra012438.1-P	Field mustard	nucleus	41.07	26.74
Zm00001d007787_P001	Maize	mitochondrion	26.79	24.0

Protein Annotations

MapMan:17.4.1.1.1	Gene3D:3.30.780.10	EnsemblPlantsGene:Bra029001	EnsemblPlants:Bra029001.1	EnsemblPlants:Bra029001.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0005488	GO:GO:0006412	GO:GO:0006413
GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
InterPro:IPR001950	UniProt:M4EJN5	PFAM:PF01253	PIRSF:PIRSF004499	PFscan:PS50296	PANTHER:PTHR10388
PANTHER:PTHR10388:SF36	SUPFAM:SSF55159	InterPro:SUI1	InterPro:SUI1_dom_sf	InterPro:SUI1_euk	TIGRFAMs:TIGR01160
UniParc:UPI000253FEE2	:	:	:	:	:

Description

AT5G54940 (E=1e-054) | eukaryotic translation initiation factor SUI1, putative

Coordinates

chrA03:+:5805735..5806073

Molecular Weight (calculated)

12733.4 Da

IEP (calculated)

9.736

GRAVY (calculated)

-0.596

Length

112 amino acids

Sequence
(BLAST)

001: MVELDIHVPS AFDPFAEAQE SDAPGTKEYI HVRIQQRNGK KSLTTVQGLK KAYSYEKILK DLKKDFCCNG NVVQDKELGK IIQLQGDQRK KVSHFFVQTG
101: IAKKDQIKIH GF

Best Arabidopsis Sequence Match ( AT5G54940.1 )
(BLAST)

001: MVELDIQIPS AYDPFAEAKD SDAPGAKENI HIRIQQRNGK KSLTTVQGLK KEYSYERILK DLKKDFCCNG NVVQDKELGK IIQLQGDQRK KVSQFLVQTG
101: IAKKDQIKIH GF

Arabidopsis Description

AT5g54940/MBG8_21 [Source:UniProtKB/TrEMBL;Acc:Q9FFT6]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.