Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 2
- plastid 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400091273 | Potato | cytosol | 78.86 | 73.48 |
| VIT_19s0090g00420.t01 | Wine grape | cytosol, nucleus, peroxisome | 64.23 | 70.54 |
| Solyc07g064620.1.1 | Tomato | cytosol | 62.6 | 68.75 |
| KRH14395 | Soybean | cytosol | 59.35 | 64.04 |
| KRH73751 | Soybean | cytosol | 58.54 | 63.16 |
| AT5G54940.3 | Thale cress | cytosol, nucleus, peroxisome | 56.1 | 61.61 |
| CDY43020 | Canola | cytoskeleton, cytosol, peroxisome | 55.28 | 60.71 |
| Bra029001.1-P | Field mustard | cytosol | 52.85 | 58.04 |
| CDY19877 | Canola | cytosol | 30.08 | 54.41 |
| Solyc03g031810.2.1 | Tomato | cytosol | 44.72 | 48.67 |
| Solyc07g064150.2.1 | Tomato | cytosol | 44.72 | 48.67 |
| Solyc10g006470.2.1 | Tomato | cytosol | 43.9 | 47.79 |
| HORVU4Hr1G010890.1 | Barley | cytosol, peroxisome | 21.95 | 45.76 |
| KRH46184 | Soybean | vacuole | 56.1 | 43.95 |
| Os02t0151501-00 | Rice | cytosol, peroxisome | 20.33 | 43.86 |
| CDY52575 | Canola | cytosol, peroxisome | 55.28 | 43.04 |
| KRG98759 | Soybean | cytosol | 47.15 | 41.13 |
| Zm00001d004854_P001 | Maize | extracellular | 21.95 | 38.03 |
| Bra002944.1-P | Field mustard | cytosol | 53.66 | 28.45 |
| CDY17292 | Canola | cytosol | 53.66 | 28.45 |
| Zm00001d007787_P001 | Maize | mitochondrion | 23.58 | 23.2 |
Protein Annotations
| MapMan:17.4.1.1.1 | Gene3D:3.30.780.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 |
| GO:GO:0005488 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR001950 | UniProt:K4CXF9 | PFAM:PF01253 |
| PIRSF:PIRSF004499 | PFscan:PS50296 | PANTHER:PTHR10388 | PANTHER:PTHR10388:SF36 | SUPFAM:SSF55159 | InterPro:SUI1 |
| InterPro:SUI1_dom_sf | InterPro:SUI1_euk | EnsemblPlantsGene:Solyc10g006280.1 | EnsemblPlants:Solyc10g006280.1.1 | TIGRFAMs:TIGR01160 | UniParc:UPI000276AB85 |
Description
No Description!
Coordinates
chr10:+:945881..946252
Molecular Weight (calculated)
14263.1 Da
IEP (calculated)
8.488
GRAVY (calculated)
-0.825
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDTNFEIPT SFDPEDQIPR SFDPFAESKD LGTRGTNKEY VHIRVQQRNG KKSWTMIEGL NKDINCEKLL KDLKKEYCCN GTIIHDKELG KVIQLQGDQR
101: KNVSQFLHKA DIVKKEQIKV HGF
101: KNVSQFLHKA DIVKKEQIKV HGF
001: MSDLEVQVPT AFDPFADANA EDSGAGTKEY VHIRVQQRNG RKSLTTVQGL KKEYSYSKIL KDLKKEFCCN GTVVQDSELG QVIQLQGDQR KNVSTFLVQA
101: GLVKKDNIKI HGF
101: GLVKKDNIKI HGF
Arabidopsis Description
Protein translation factor SUI1 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JV4]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.