Factsheet for Solyc03g031810.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
peroxisome 1
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH55655	Soybean	cytosol	91.15	91.15
KRH25862	Soybean	cytosol	90.27	90.27
KRH55654	Soybean	cytosol	90.27	90.27
GSMUA_Achr2P14050_001	Banana	cytosol	89.38	89.38
GSMUA_Achr4P24000_001	Banana	cytosol	88.5	88.5
Solyc10g006470.2.1	Tomato	cytosol	88.5	88.5
Solyc07g064150.2.1	Tomato	cytosol	88.5	88.5
GSMUA_Achr8P07330_001	Banana	cytosol, peroxisome, plastid	87.61	87.61
GSMUA_Achr9P11860_001	Banana	cytosol	87.61	87.61
GSMUA_Achr1P14620_001	Banana	cytosol, peroxisome, plastid	86.73	86.73
Os05t0498400-02	Rice	cytosol	85.84	84.35
EES18447	Sorghum	cytosol	84.96	83.48
TraesCS3D01G320600.1	Wheat	cytosol, peroxisome, plastid	84.96	83.48
TraesCS3B01G356600.1	Wheat	cytosol, peroxisome, plastid	84.96	83.48
TraesCS3A01G327200.1	Wheat	cytosol, peroxisome, plastid	84.96	83.48
Os01t0794500-00	Rice	cytosol, peroxisome, plastid	84.07	82.61
TraesCS1A01G316900.1	Wheat	cytosol	83.19	81.74
TraesCS1B01G329300.1	Wheat	cytosol	83.19	81.74
TraesCS1D01G316900.1	Wheat	cytosol	83.19	81.74
EES03750	Sorghum	cytosol, peroxisome, plastid	83.19	81.74
HORVU3Hr1G077960.2	Barley	peroxisome, plastid	78.76	72.36
Zm00001d038594_P002	Maize	cytosol, peroxisome, plastid	74.34	71.19
GSMUA_Achr7P03360_001	Banana	cytosol	42.48	69.57
VIT_19s0177g00100.t01	Wine grape	cytosol, nucleus, peroxisome	89.38	68.71
Solyc07g064620.1.1	Tomato	cytosol	61.95	62.5
GSMUA_Achr4P27690_001	Banana	cytosol	86.73	56.98
Zm00001d043217_P002	Maize	cytosol, golgi, peroxisome	73.45	52.2
PGSC0003DMT400061864	Potato	cytosol, nucleus, peroxisome	98.23	45.68
Solyc10g006280.1.1	Tomato	cytosol	48.67	44.72
GSMUA_Achr7P00190_001	Banana	cytosol, nucleus, peroxisome, plastid	84.96	43.64

Protein Annotations

MapMan:17.4.1.1.1	Gene3D:3.30.780.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003743
GO:GO:0005488	GO:GO:0006412	GO:GO:0006413	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR001950	UniProt:K4BFF3	PFAM:PF01253
PIRSF:PIRSF004499	PFscan:PS50296	PANTHER:PTHR10388	PANTHER:PTHR10388:SF18	SUPFAM:SSF55159	InterPro:SUI1
InterPro:SUI1_dom_sf	InterPro:SUI1_euk	EnsemblPlantsGene:Solyc03g031810.2	EnsemblPlants:Solyc03g031810.2.1	TIGRFAMs:TIGR01160	UniParc:UPI0002767626

Description

No Description!

Coordinates

chr3:-:4287112..4288558

Molecular Weight (calculated)

12638.2 Da

IEP (calculated)

9.614

GRAVY (calculated)

-0.502

Length

113 amino acids

Sequence
(BLAST)

001: MSELDIQVPT TFDPFADANA QNSGAGAKEY VHIRVQQRNG RKSLTTVQGL KKEFSYNKIL KDLKKEFCCN GTVVQDPELG QVIQLQGDQR KNVSTFLIQA
101: GIVKKDNIKI HGF

Best Arabidopsis Sequence Match ( AT4G27130.1 )
(BLAST)

001: MSELDSQVPT AFDPFADANA EDSGAGTKEY VHIRVQQRNG RKSLTTVQGL KKEYSYTKIL KDLKKEFCCN GTVVQDSELG QVIQLQGDQR KNVSTFLVQA
101: GLVKKDNIKI HGF

Arabidopsis Description

Protein translation factor SUI1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P41568]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.