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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:
  • nucleus 4
  • peroxisome 1
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc03g031810.2.1 Tomato cytosol 45.68 98.23
KRH55655 Soybean cytosol 41.56 89.38
KRH55654 Soybean cytosol 41.15 88.5
KRH25862 Soybean cytosol 41.15 88.5
PGSC0003DMT400037400 Potato cytosol 40.74 87.61
GSMUA_Achr2P14050_001 Banana cytosol 40.74 87.61
PGSC0003DMT400049575 Potato cytosol 40.33 86.73
GSMUA_Achr4P24000_001 Banana cytosol 40.33 86.73
GSMUA_Achr8P07330_001 Banana cytosol, peroxisome, plastid 39.92 85.84
GSMUA_Achr9P11860_001 Banana cytosol 39.92 85.84
PGSC0003DMT400065815 Potato cytosol 39.51 84.96
GSMUA_Achr1P14620_001 Banana cytosol, peroxisome, plastid 39.51 84.96
Os05t0498400-02 Rice cytosol 39.09 82.61
EES18447 Sorghum cytosol 38.68 81.74
TraesCS3A01G327200.1 Wheat cytosol, peroxisome, plastid 38.68 81.74
TraesCS3B01G356600.1 Wheat cytosol, peroxisome, plastid 38.68 81.74
TraesCS3D01G320600.1 Wheat cytosol, peroxisome, plastid 38.68 81.74
Os01t0794500-00 Rice cytosol, peroxisome, plastid 38.27 80.87
TraesCS1A01G316900.1 Wheat cytosol 37.86 80.0
TraesCS1B01G329300.1 Wheat cytosol 37.86 80.0
TraesCS1D01G316900.1 Wheat cytosol 37.86 80.0
EES03750 Sorghum cytosol, peroxisome, plastid 37.86 80.0
HORVU3Hr1G077960.2 Barley peroxisome, plastid 36.21 71.54
Zm00001d038594_P002 Maize cytosol, peroxisome, plastid 34.57 71.19
GSMUA_Achr7P03360_001 Banana cytosol 19.75 69.57
VIT_19s0177g00100.t01 Wine grape cytosol, nucleus, peroxisome 41.56 68.71
GSMUA_Achr4P27690_001 Banana cytosol 39.92 56.4
Zm00001d043217_P002 Maize cytosol, golgi, peroxisome 34.98 53.46
PGSC0003DMT400057195 Potato cytosol 30.04 51.05
PGSC0003DMT400091273 Potato cytosol 25.1 46.21
GSMUA_Achr7P00190_001 Banana cytosol, nucleus, peroxisome, plastid 39.92 44.09
Protein Annotations
Gene3D:1.10.10.60EntrezGene:102593095MapMan:17.4.1.1.1Gene3D:3.30.780.10GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003723GO:GO:0003743GO:GO:0005488GO:GO:0006412GO:GO:0006413
GO:GO:0008135GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0019538
InterPro:Homeobox-like_sfInterPro:IPR001950InterPro:IPR017930UniProt:M1C862InterPro:Myb_domPFAM:PF00249
PFAM:PF01253EnsemblPlantsGene:PGSC0003DMG400024072PGSC:PGSC0003DMG400024072EnsemblPlants:PGSC0003DMT400061864PFscan:PS50296PFscan:PS51294
PANTHER:PTHR10388PANTHER:PTHR10388:SF18InterPro:SANT/MybSMART:SM00717SUPFAM:SSF46689SUPFAM:SSF55159
InterPro:SUI1InterPro:SUI1_dom_sfInterPro:SUI1_eukTIGRFAMs:TIGR01160UniParc:UPI000296E6A9:
Description
Translation factor [Source:PGSC_GENE;Acc:PGSC0003DMG400024072]
Coordinates
chr3:-:2694938..2700607
Molecular Weight (calculated)
27770.2 Da
IEP (calculated)
7.768
GRAVY (calculated)
-0.399
Length
243 amino acids
Sequence
(BLAST)
001: MGDVFTKVGG EDEACRRLEF CIQGLFVVLL KARFMSELDI QVPTTFDENR LFLCFRVITD WNNMACIMWT DPFADANAQN SGAGAKEYVH IRVQQRNGRK
101: SLTTVQGLKK EFSYNKILKD LKKEFCCNGT VVQDPELGQV IQLQGDQRKN VSTFLIQAGI VKKDNIKIHD SSEKISSSDY FRADSQGKIL KEIETEFSED
201: EEALIIRMYN LLGKRWSLIA GRIPGRSTEE IVKYWNTRSS TSQ
Best Arabidopsis Sequence Match ( AT4G27130.1 )
(BLAST)
001: MSELDSQVPT AFDPFADANA EDSGAGTKEY VHIRVQQRNG RKSLTTVQGL KKEYSYTKIL KDLKKEFCCN GTVVQDSELG QVIQLQGDQR KNVSTFLVQA
101: GLVKKDNIKI HGF
Arabidopsis Description
Protein translation factor SUI1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P41568]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.