Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- peroxisome 1
- mitochondrion 1
- cytosol 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc03g031810.2.1 | Tomato | cytosol | 45.68 | 98.23 |
KRH55655 | Soybean | cytosol | 41.56 | 89.38 |
KRH55654 | Soybean | cytosol | 41.15 | 88.5 |
KRH25862 | Soybean | cytosol | 41.15 | 88.5 |
PGSC0003DMT400037400 | Potato | cytosol | 40.74 | 87.61 |
GSMUA_Achr2P14050_001 | Banana | cytosol | 40.74 | 87.61 |
PGSC0003DMT400049575 | Potato | cytosol | 40.33 | 86.73 |
GSMUA_Achr4P24000_001 | Banana | cytosol | 40.33 | 86.73 |
GSMUA_Achr8P07330_001 | Banana | cytosol, peroxisome, plastid | 39.92 | 85.84 |
GSMUA_Achr9P11860_001 | Banana | cytosol | 39.92 | 85.84 |
PGSC0003DMT400065815 | Potato | cytosol | 39.51 | 84.96 |
GSMUA_Achr1P14620_001 | Banana | cytosol, peroxisome, plastid | 39.51 | 84.96 |
Os05t0498400-02 | Rice | cytosol | 39.09 | 82.61 |
EES18447 | Sorghum | cytosol | 38.68 | 81.74 |
TraesCS3A01G327200.1 | Wheat | cytosol, peroxisome, plastid | 38.68 | 81.74 |
TraesCS3B01G356600.1 | Wheat | cytosol, peroxisome, plastid | 38.68 | 81.74 |
TraesCS3D01G320600.1 | Wheat | cytosol, peroxisome, plastid | 38.68 | 81.74 |
Os01t0794500-00 | Rice | cytosol, peroxisome, plastid | 38.27 | 80.87 |
TraesCS1A01G316900.1 | Wheat | cytosol | 37.86 | 80.0 |
TraesCS1B01G329300.1 | Wheat | cytosol | 37.86 | 80.0 |
TraesCS1D01G316900.1 | Wheat | cytosol | 37.86 | 80.0 |
EES03750 | Sorghum | cytosol, peroxisome, plastid | 37.86 | 80.0 |
HORVU3Hr1G077960.2 | Barley | peroxisome, plastid | 36.21 | 71.54 |
Zm00001d038594_P002 | Maize | cytosol, peroxisome, plastid | 34.57 | 71.19 |
GSMUA_Achr7P03360_001 | Banana | cytosol | 19.75 | 69.57 |
VIT_19s0177g00100.t01 | Wine grape | cytosol, nucleus, peroxisome | 41.56 | 68.71 |
GSMUA_Achr4P27690_001 | Banana | cytosol | 39.92 | 56.4 |
Zm00001d043217_P002 | Maize | cytosol, golgi, peroxisome | 34.98 | 53.46 |
PGSC0003DMT400057195 | Potato | cytosol | 30.04 | 51.05 |
PGSC0003DMT400091273 | Potato | cytosol | 25.1 | 46.21 |
GSMUA_Achr7P00190_001 | Banana | cytosol, nucleus, peroxisome, plastid | 39.92 | 44.09 |
Protein Annotations
Gene3D:1.10.10.60 | EntrezGene:102593095 | MapMan:17.4.1.1.1 | Gene3D:3.30.780.10 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0003677 | GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0006412 | GO:GO:0006413 |
GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 |
InterPro:Homeobox-like_sf | InterPro:IPR001950 | InterPro:IPR017930 | UniProt:M1C862 | InterPro:Myb_dom | PFAM:PF00249 |
PFAM:PF01253 | EnsemblPlantsGene:PGSC0003DMG400024072 | PGSC:PGSC0003DMG400024072 | EnsemblPlants:PGSC0003DMT400061864 | PFscan:PS50296 | PFscan:PS51294 |
PANTHER:PTHR10388 | PANTHER:PTHR10388:SF18 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | SUPFAM:SSF55159 |
InterPro:SUI1 | InterPro:SUI1_dom_sf | InterPro:SUI1_euk | TIGRFAMs:TIGR01160 | UniParc:UPI000296E6A9 | : |
Description
Translation factor [Source:PGSC_GENE;Acc:PGSC0003DMG400024072]
Coordinates
chr3:-:2694938..2700607
Molecular Weight (calculated)
27770.2 Da
IEP (calculated)
7.768
GRAVY (calculated)
-0.399
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDVFTKVGG EDEACRRLEF CIQGLFVVLL KARFMSELDI QVPTTFDENR LFLCFRVITD WNNMACIMWT DPFADANAQN SGAGAKEYVH IRVQQRNGRK
101: SLTTVQGLKK EFSYNKILKD LKKEFCCNGT VVQDPELGQV IQLQGDQRKN VSTFLIQAGI VKKDNIKIHD SSEKISSSDY FRADSQGKIL KEIETEFSED
201: EEALIIRMYN LLGKRWSLIA GRIPGRSTEE IVKYWNTRSS TSQ
101: SLTTVQGLKK EFSYNKILKD LKKEFCCNGT VVQDPELGQV IQLQGDQRKN VSTFLIQAGI VKKDNIKIHD SSEKISSSDY FRADSQGKIL KEIETEFSED
201: EEALIIRMYN LLGKRWSLIA GRIPGRSTEE IVKYWNTRSS TSQ
001: MSELDSQVPT AFDPFADANA EDSGAGTKEY VHIRVQQRNG RKSLTTVQGL KKEYSYTKIL KDLKKEFCCN GTVVQDSELG QVIQLQGDQR KNVSTFLVQA
101: GLVKKDNIKI HGF
101: GLVKKDNIKI HGF
Arabidopsis Description
Protein translation factor SUI1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P41568]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.