CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 2
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0794500-00	Rice	cytosol, peroxisome, plastid	98.26	98.26
EES18447	Sorghum	cytosol	93.91	93.91
TraesCS3D01G320600.1	Wheat	cytosol, peroxisome, plastid	92.17	92.17
TraesCS3B01G356600.1	Wheat	cytosol, peroxisome, plastid	92.17	92.17
TraesCS3A01G327200.1	Wheat	cytosol, peroxisome, plastid	92.17	92.17
PGSC0003DMT400049575	Potato	cytosol	89.57	91.15
Solyc07g064150.2.1	Tomato	cytosol	89.57	91.15
PGSC0003DMT400037400	Potato	cytosol	87.83	89.38
Solyc10g006470.2.1	Tomato	cytosol	87.83	89.38
PGSC0003DMT400065815	Potato	cytosol	86.96	88.5
GSMUA_Achr9P11860_001	Banana	cytosol	86.09	87.61
VIT_12s0059g02370.t01	Wine grape	cytosol	86.09	87.61
KRH25862	Soybean	cytosol	85.22	86.73
KRH25407	Soybean	cytosol, peroxisome, plastid	85.22	86.73
KRH55655	Soybean	cytosol	84.35	85.84
KRH55654	Soybean	cytosol	84.35	85.84
AT1G54290.1	Thale cress	cytosol, peroxisome, plastid	84.35	85.84
Bra030890.1-P	Field mustard	cytosol, peroxisome, plastid	85.22	85.22
Bra014363.1-P	Field mustard	cytosol, peroxisome, plastid	85.22	85.22
CDY08224	Canola	cytosol, peroxisome, plastid	85.22	85.22
KRH56096	Soybean	cytosol, peroxisome, plastid	83.48	84.96
AT4G27130.1	Thale cress	cytosol, peroxisome, plastid	83.48	84.96
CDY14282	Canola	cytosol, peroxisome, plastid	83.48	84.96
CDX97378	Canola	cytosol, peroxisome, plastid	83.48	84.96
Bra026376.1-P	Field mustard	cytosol, peroxisome, plastid	83.48	84.96
CDY10602	Canola	cytosol, peroxisome, plastid	85.22	84.48
CDY02466	Canola	cytosol, peroxisome, plastid	85.22	84.48
AT5G54760.3	Thale cress	cytosol, peroxisome, plastid	82.61	84.07
Bra010410.1-P	Field mustard	cytosol, peroxisome, plastid	82.61	84.07
Bra019068.1-P	Field mustard	cytosol, peroxisome, plastid	82.61	84.07
CDY26128	Canola	cytosol, peroxisome, plastid	83.48	83.48
CDY08222	Canola	cytosol, peroxisome, plastid	83.48	83.48
Solyc03g031810.2.1	Tomato	cytosol	81.74	83.19
HORVU3Hr1G077960.2	Barley	peroxisome, plastid	85.22	79.67
VIT_19s0177g00100.t01	Wine grape	cytosol, nucleus, peroxisome	88.7	69.39
Zm00001d043217_P002	Maize	cytosol, golgi, peroxisome	87.83	63.52
CDY08751	Canola	cytosol, peroxisome, plastid	48.7	56.57
CDY46663	Canola	plastid	83.48	48.98
CDX92777	Canola	mitochondrion	83.48	47.29
PGSC0003DMT400061864	Potato	cytosol, nucleus, peroxisome	80.0	37.86
Bra012438.1-P	Field mustard	nucleus	51.3	34.3
EES12898	Sorghum	nucleus, plastid	54.78	24.14

Protein Annotations

MapMan:17.4.1.1.1	Gene3D:3.30.780.10	EntrezGene:8055235	UniProt:C5XME1	EnsemblPlants:EES03750	ProteinID:EES03750
ProteinID:EES03750.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0005488
GO:GO:0006412	GO:GO:0006413	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	InterPro:IPR001950	PFAM:PF01253	PIRSF:PIRSF004499	PFscan:PS50296
PANTHER:PTHR10388	PANTHER:PTHR10388:SF14	EnsemblPlantsGene:SORBI_3003G323600	SUPFAM:SSF55159	InterPro:SUI1	InterPro:SUI1_dom_sf
InterPro:SUI1_euk	TIGRFAMs:TIGR01160	UniParc:UPI0001A85717	RefSeq:XP_002458630.1	:	:

Description

hypothetical protein

Coordinates

chr3:-:65004024..65007433

Molecular Weight (calculated)

12730.1 Da

IEP (calculated)

8.211

GRAVY (calculated)

-0.484

Length

115 amino acids

Sequence
(BLAST)

001: MSDLDVQLPS AFDPFAEANA EDSSAGAGSK DYVHVRIQQR NGRKSLTTVQ GLKKEYSYNK ILKDLKKEFC CNGTVVQDPE LGQVIQLQGD QRKNVATFLV
101: EAGIVKKESI KIHGF

Best Arabidopsis Sequence Match ( AT1G54290.1 )
(BLAST)

001: MSDLEVQVPT AFDPFADANA EDSGAGTKEY VHIRVQQRNG RKSLTTVQGL KKEYSYSKIL KDLKKEFCCN GTVVQDSELG QVIQLQGDQR KNVSTFLVQA
101: GLVKKDNIKI HGF

Arabidopsis Description

Protein translation factor SUI1 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JV4]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.