Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 2
- plastid 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030890.1-P | Field mustard | cytosol, peroxisome, plastid | 100.0 | 100.0 |
| CDY02466 | Canola | cytosol, peroxisome, plastid | 100.0 | 99.14 |
| AT1G54290.1 | Thale cress | cytosol, peroxisome, plastid | 96.52 | 98.23 |
| Bra026376.1-P | Field mustard | cytosol, peroxisome, plastid | 93.91 | 95.58 |
| Bra010410.1-P | Field mustard | cytosol, peroxisome, plastid | 93.04 | 94.69 |
| Bra019068.1-P | Field mustard | cytosol, peroxisome, plastid | 92.17 | 93.81 |
| TraesCS3D01G320600.1 | Wheat | cytosol, peroxisome, plastid | 88.7 | 88.7 |
| TraesCS3B01G356600.1 | Wheat | cytosol, peroxisome, plastid | 88.7 | 88.7 |
| TraesCS3A01G327200.1 | Wheat | cytosol, peroxisome, plastid | 88.7 | 88.7 |
| PGSC0003DMT400065815 | Potato | cytosol | 86.09 | 87.61 |
| GSMUA_Achr4P24000_001 | Banana | cytosol | 86.09 | 87.61 |
| KRH55655 | Soybean | cytosol | 86.09 | 87.61 |
| KRH55654 | Soybean | cytosol | 86.09 | 87.61 |
| Os05t0498400-02 | Rice | cytosol | 86.96 | 86.96 |
| PGSC0003DMT400037400 | Potato | cytosol | 85.22 | 86.73 |
| KRH25862 | Soybean | cytosol | 85.22 | 86.73 |
| GSMUA_Achr9P11860_001 | Banana | cytosol | 85.22 | 86.73 |
| EES18447 | Sorghum | cytosol | 86.09 | 86.09 |
| GSMUA_Achr2P14050_001 | Banana | cytosol | 84.35 | 85.84 |
| PGSC0003DMT400049575 | Potato | cytosol | 84.35 | 85.84 |
| Solyc07g064150.2.1 | Tomato | cytosol | 84.35 | 85.84 |
| Solyc10g006470.2.1 | Tomato | cytosol | 84.35 | 85.84 |
| Os01t0794500-00 | Rice | cytosol, peroxisome, plastid | 85.22 | 85.22 |
| EES03750 | Sorghum | cytosol, peroxisome, plastid | 85.22 | 85.22 |
| GSMUA_Achr8P07330_001 | Banana | cytosol, peroxisome, plastid | 83.48 | 84.96 |
| GSMUA_Achr1P14620_001 | Banana | cytosol, peroxisome, plastid | 83.48 | 84.96 |
| TraesCS1D01G316900.1 | Wheat | cytosol | 84.35 | 84.35 |
| TraesCS1B01G329300.1 | Wheat | cytosol | 84.35 | 84.35 |
| TraesCS1A01G316900.1 | Wheat | cytosol | 84.35 | 84.35 |
| HORVU3Hr1G077960.2 | Barley | peroxisome, plastid | 80.87 | 75.61 |
| Zm00001d038594_P002 | Maize | cytosol, peroxisome, plastid | 75.65 | 73.73 |
| GSMUA_Achr7P03360_001 | Banana | cytosol | 40.87 | 68.12 |
| VIT_19s0177g00100.t01 | Wine grape | cytosol, nucleus, peroxisome | 84.35 | 65.99 |
| Bra029001.1-P | Field mustard | cytosol | 58.26 | 59.82 |
| GSMUA_Achr4P27690_001 | Banana | cytosol | 86.96 | 58.14 |
| Zm00001d043217_P002 | Maize | cytosol, golgi, peroxisome | 76.52 | 55.35 |
| GSMUA_Achr7P00190_001 | Banana | cytosol, nucleus, peroxisome, plastid | 84.35 | 44.09 |
| Bra012438.1-P | Field mustard | nucleus | 54.78 | 36.63 |
| Bra002944.1-P | Field mustard | cytosol | 58.26 | 28.88 |
Protein Annotations
| MapMan:17.4.1.1.1 | Gene3D:3.30.780.10 | EnsemblPlantsGene:Bra014363 | EnsemblPlants:Bra014363.1 | EnsemblPlants:Bra014363.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0006412 | GO:GO:0006413 |
| GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 |
| InterPro:IPR001950 | UniProt:M4EQ19 | PFAM:PF01253 | PIRSF:PIRSF004499 | PFscan:PS50296 | PANTHER:PTHR10388 |
| PANTHER:PTHR10388:SF14 | SUPFAM:SSF55159 | InterPro:SUI1 | InterPro:SUI1_dom_sf | InterPro:SUI1_euk | TIGRFAMs:TIGR01160 |
| UniParc:UPI0001BA92A7 | SEG:seg | : | : | : | : |
Description
AT1G54290 (E=8e-052) | eukaryotic translation initiation factor SUI1, putative
Coordinates
chrA08:-:1397281..1398060
Molecular Weight (calculated)
12717.2 Da
IEP (calculated)
8.709
GRAVY (calculated)
-0.474
Length
115 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDLEVQVPT AFDPFADANA EDAGAGAGTK EYVHIRVQQR NGRKSLTTVQ GLKKEYSYTK ILKDLKKEFC CNGTVVQDSE LGQVIQLQGD QRKNVSTFLV
101: QAGLVKKDNI KIHGF
101: QAGLVKKDNI KIHGF
001: MSDLEVQVPT AFDPFADANA EDSGAGTKEY VHIRVQQRNG RKSLTTVQGL KKEYSYSKIL KDLKKEFCCN GTVVQDSELG QVIQLQGDQR KNVSTFLVQA
101: GLVKKDNIKI HGF
101: GLVKKDNIKI HGF
Arabidopsis Description
Protein translation factor SUI1 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JV4]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.