Factsheet for TraesCS1A01G316900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 2
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G316900.1	Wheat	cytosol	100.0	100.0
TraesCS1B01G329300.1	Wheat	cytosol	100.0	100.0
EES18447	Sorghum	cytosol	96.52	96.52
Os05t0498400-02	Rice	cytosol	95.65	95.65
TraesCS3A01G327200.1	Wheat	cytosol, peroxisome, plastid	89.57	89.57
PGSC0003DMT400037400	Potato	cytosol	86.96	88.5
PGSC0003DMT400049575	Potato	cytosol	86.96	88.5
GSMUA_Achr9P11860_001	Banana	cytosol	86.96	88.5
Solyc07g064150.2.1	Tomato	cytosol	86.96	88.5
TraesCS2A01G219000.1	Wheat	cytosol, peroxisome, plastid	87.83	87.83
Solyc10g006470.2.1	Tomato	cytosol	86.09	87.61
VIT_12s0059g02370.t01	Wine grape	cytosol	86.09	87.61
PGSC0003DMT400065815	Potato	cytosol	85.22	86.73
KRH25407	Soybean	cytosol, peroxisome, plastid	83.48	84.96
CDY08224	Canola	cytosol, peroxisome, plastid	84.35	84.35
Bra030890.1-P	Field mustard	cytosol, peroxisome, plastid	84.35	84.35
Bra014363.1-P	Field mustard	cytosol, peroxisome, plastid	84.35	84.35
KRH25862	Soybean	cytosol	82.61	84.07
CDY02466	Canola	cytosol, peroxisome, plastid	84.35	83.62
CDY10602	Canola	cytosol, peroxisome, plastid	84.35	83.62
KRH55654	Soybean	cytosol	81.74	83.19
KRH56096	Soybean	cytosol, peroxisome, plastid	81.74	83.19
KRH55655	Soybean	cytosol	81.74	83.19
Solyc03g031810.2.1	Tomato	cytosol	81.74	83.19
AT1G54290.1	Thale cress	cytosol, peroxisome, plastid	81.74	83.19
Zm00001d038594_P002	Maize	cytosol, peroxisome, plastid	85.22	83.05
CDY26128	Canola	cytosol, peroxisome, plastid	82.61	82.61
CDY08222	Canola	cytosol, peroxisome, plastid	82.61	82.61
CDY14282	Canola	cytosol, peroxisome, plastid	80.87	82.3
CDX97378	Canola	cytosol, peroxisome, plastid	80.87	82.3
Bra026376.1-P	Field mustard	cytosol, peroxisome, plastid	80.87	82.3
AT4G27130.1	Thale cress	cytosol, peroxisome, plastid	80.87	82.3
Bra019068.1-P	Field mustard	cytosol, peroxisome, plastid	80.0	81.42
Bra010410.1-P	Field mustard	cytosol, peroxisome, plastid	80.0	81.42
AT5G54760.3	Thale cress	cytosol, peroxisome, plastid	80.0	81.42
VIT_19s0177g00100.t01	Wine grape	cytosol, nucleus, peroxisome	86.96	68.03
CDY08751	Canola	cytosol, peroxisome, plastid	46.96	54.55
CDY46663	Canola	plastid	80.87	47.45
CDX92777	Canola	mitochondrion	80.87	45.81
PGSC0003DMT400061864	Potato	cytosol, nucleus, peroxisome	80.0	37.86
Bra012438.1-P	Field mustard	nucleus	49.57	33.14
TraesCS2A01G474500.1	Wheat	plastid	60.0	29.24

Protein Annotations

MapMan:17.4.1.1.1	Gene3D:3.30.780.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003743
GO:GO:0005488	GO:GO:0006412	GO:GO:0006413	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR001950	PFAM:PF01253	PIRSF:PIRSF004499
PFscan:PS50296	PANTHER:PTHR10388	PANTHER:PTHR10388:SF14	SUPFAM:SSF55159	InterPro:SUI1	InterPro:SUI1_dom_sf
InterPro:SUI1_euk	TIGRFAMs:TIGR01160	EnsemblPlantsGene:TraesCS1A01G316900	EnsemblPlants:TraesCS1A01G316900.1	TIGR:cd11566	:

Description

No Description!

Coordinates

chr1A:+:508527082..508527863

Molecular Weight (calculated)

12648.2 Da

IEP (calculated)

8.728

GRAVY (calculated)

-0.386

Length

115 amino acids

Sequence
(BLAST)

001: MSDLDVTLPS AFDPFAEANA EDAGAGPGAK DYVHVRIQQR NGRKSLTTVQ GLKKEFSYNK ILKDLKKEFC CNGTVVQDPE LGQVIQLQGD QRKNVATFLV
101: QAGIAKKELI KIHGF

Best Arabidopsis Sequence Match ( AT1G54290.1 )
(BLAST)

001: MSDLEVQVPT AFDPFADANA EDSGAGTKEY VHIRVQQRNG RKSLTTVQGL KKEYSYSKIL KDLKKEFCCN GTVVQDSELG QVIQLQGDQR KNVSTFLVQA
101: GLVKKDNIKI HGF

Arabidopsis Description

Protein translation factor SUI1 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JV4]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.