Factsheet for TraesCS2A01G474500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
peroxisome 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G107100.1	Barley	cytosol, mitochondrion, peroxisome	41.1	80.83
TraesCS3A01G327200.1	Wheat	cytosol, peroxisome, plastid	30.08	61.74
TraesCS1A01G316900.1	Wheat	cytosol	29.24	60.0
TraesCS2A01G219000.1	Wheat	cytosol, peroxisome, plastid	27.97	57.39
TraesCS2B01G498100.1	Wheat	plastid	47.03	47.23
EES12898	Sorghum	nucleus, plastid	36.02	32.57
Os04t0627900-01	Rice	nucleus, peroxisome	31.36	30.33

Protein Annotations

MapMan:17.4.1.1.1	Gene3D:3.30.780.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003743
GO:GO:0005488	GO:GO:0006412	GO:GO:0006413	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR001950	PFAM:PF01253	PFscan:PS50296
PANTHER:PTHR10388	PANTHER:PTHR10388:SF12	SUPFAM:SSF55159	InterPro:SUI1	InterPro:SUI1_dom_sf	InterPro:SUI1_euk
TIGRFAMs:TIGR01160	EnsemblPlantsGene:TraesCS2A01G474500	EnsemblPlants:TraesCS2A01G474500.1	TIGR:cd11566	SEG:seg	:

Description

No Description!

Coordinates

chr2A:-:715617652..715618362

Molecular Weight (calculated)

24907.2 Da

IEP (calculated)

9.598

GRAVY (calculated)

-0.597

Length

236 amino acids

Sequence
(BLAST)

001: MQRKTNTKPQ AISSAGAPKP AAVSPYSSIK SNTDVAASEL EQRVKVSPPP PFASDRWAAG GASSSDDEED TKKTKNKKAA ASKAVPARKS GKAKGKDRYL
101: VAPPAEADQE FMPAGGAPDP FADNDALPPS SFDPFADARA DDAVAGAGVD DACVHLRVQQ RNGKKTLTTV QGLSASYNYA KVLRDLKREL CCNGTVVEDK
201: ELGNVIQLQG DHRKRVAGFL AKAGLAKTEC IKVHGF

Best Arabidopsis Sequence Match ( AT1G54290.1 )
(BLAST)

001: MSDLEVQVPT AFDPFADANA EDSGAGTKEY VHIRVQQRNG RKSLTTVQGL KKEYSYSKIL KDLKKEFCCN GTVVQDSELG QVIQLQGDQR KNVSTFLVQA
101: GLVKKDNIKI HGF

Arabidopsis Description

Protein translation factor SUI1 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JV4]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.