Factsheet for TraesCS2B01G498100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
peroxisome 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G107100.1	Barley	cytosol, mitochondrion, peroxisome	45.11	88.33
TraesCS3B01G356600.1	Wheat	cytosol, peroxisome, plastid	30.21	61.74
TraesCS1B01G329300.1	Wheat	cytosol	28.51	58.26
TraesCS2B01G244400.1	Wheat	cytosol, peroxisome, plastid	28.09	57.39
TraesCS2A01G474500.1	Wheat	plastid	47.23	47.03
EES12898	Sorghum	nucleus, plastid	39.57	35.63
Os04t0627900-01	Rice	nucleus, peroxisome	32.77	31.56

Protein Annotations

MapMan:17.4.1.1.1	Gene3D:3.30.780.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003743
GO:GO:0005488	GO:GO:0006412	GO:GO:0006413	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR001950	PFAM:PF01253	PFscan:PS50296
PANTHER:PTHR10388	PANTHER:PTHR10388:SF12	SUPFAM:SSF55159	InterPro:SUI1	InterPro:SUI1_dom_sf	InterPro:SUI1_euk
TIGRFAMs:TIGR01160	EnsemblPlantsGene:TraesCS2B01G498100	EnsemblPlants:TraesCS2B01G498100.1	TIGR:cd11566	SEG:seg	:

Description

No Description!

Coordinates

chr2B:-:694532301..694533008

Molecular Weight (calculated)

24951.4 Da

IEP (calculated)

9.888

GRAVY (calculated)

-0.652

Length

235 amino acids

Sequence
(BLAST)

001: MQRKTNFKPP AISTARAPGA HTPAGVSPPS SIKSNTDVAL PELEQRVKVS PPPPFASDRW AAGGASSSDE EEDTKKTKNK KAATGKTVPA RKSGKAKGKD
101: RYLVAPKAEA DQEFMPAGVP DPFADNDAPP PSSFDPFADD AAGGGAGVDE AYVHLRVQQR NGKKTLTTVQ GLSASYNYAK VLRDLKRELC CNGTVVEDKE
201: LGNVIQLQGD HRKRVAGFLA KAGLAKTECI KVHGF

Best Arabidopsis Sequence Match ( AT1G54290.1 )
(BLAST)

001: MSDLEVQVPT AFDPFADANA EDSGAGTKEY VHIRVQQRNG RKSLTTVQGL KKEYSYSKIL KDLKKEFCCN GTVVQDSELG QVIQLQGDQR KNVSTFLVQA
101: GLVKKDNIKI HGF

Arabidopsis Description

Protein translation factor SUI1 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JV4]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.