Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- peroxisome 1
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G107100.1 | Barley | cytosol, mitochondrion, peroxisome | 28.69 | 58.33 |
| Os01t0794500-00 | Rice | cytosol, peroxisome, plastid | 25.41 | 53.91 |
| Os05t0498400-02 | Rice | cytosol | 25.41 | 53.91 |
| Os02t0151501-00 | Rice | cytosol, peroxisome | 9.84 | 42.11 |
| TraesCS2B01G498100.1 | Wheat | plastid | 31.56 | 32.77 |
| TraesCS2A01G474500.1 | Wheat | plastid | 30.33 | 31.36 |
| EES12898 | Sorghum | nucleus, plastid | 32.38 | 30.27 |
Protein Annotations
| MapMan:17.4.1.1.1 | Gene3D:3.30.780.10 | ProteinID:BAF15869.1 | ProteinID:BAS91135.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0008135 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR001950 |
| EnsemblPlantsGene:Os04g0627900 | EnsemblPlants:Os04t0627900-01 | PFAM:PF01253 | PFscan:PS50296 | PANTHER:PTHR10388 | PANTHER:PTHR10388:SF12 |
| UniProt:Q0J9W8 | SUPFAM:SSF55159 | InterPro:SUI1 | InterPro:SUI1_dom_sf | InterPro:SUI1_euk | UniParc:UPI0000DD92B2 |
| SEG:seg | : | : | : | : | : |
Description
UNP1Translation initiation factor SUI1 domain containing protein. (Os04t0627900-01)
Coordinates
chr4:-:31957711..31958630
Molecular Weight (calculated)
26539.5 Da
IEP (calculated)
11.909
GRAVY (calculated)
-1.025
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: CNAKNEREEH ESSGDLERND PQSQETRRCR RVAVVEVGEQ QQGHQGVAAA AAVVRAVGRR LVVRRGGGGR RRRRRRRPSA AAAAAGEQEG KVRQGPRGVQ
101: EQVPCPPPRR GGSGGGGRRE QRQQVDVRGA GGVRPAGGDV RRVRGRGGGG RRRGRGAGGD YVHVRVQQRN GRKTLTTVQG IGGEYNYAKV LRDLKRELCC
201: NGNVVEDKEL GKIIQLQGDH RNSVSDFLAK AGMVRKDNIK VHGF
101: EQVPCPPPRR GGSGGGGRRE QRQQVDVRGA GGVRPAGGDV RRVRGRGGGG RRRGRGAGGD YVHVRVQQRN GRKTLTTVQG IGGEYNYAKV LRDLKRELCC
201: NGNVVEDKEL GKIIQLQGDH RNSVSDFLAK AGMVRKDNIK VHGF
001: MSDLEVQVPT AFDPFADANA EDSGAGTKEY VHIRVQQRNG RKSLTTVQGL KKEYSYSKIL KDLKKEFCCN GTVVQDSELG QVIQLQGDQR KNVSTFLVQA
101: GLVKKDNIKI HGF
101: GLVKKDNIKI HGF
Arabidopsis Description
Protein translation factor SUI1 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JV4]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.