Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- plastid 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g006280.1.1 | Tomato | cytosol | 73.48 | 78.86 |
| VIT_19s0090g00420.t01 | Wine grape | cytosol, nucleus, peroxisome | 64.39 | 75.89 |
| KRH14395 | Soybean | cytosol | 58.33 | 67.54 |
| KRH73751 | Soybean | cytosol | 57.58 | 66.67 |
| CDY43020 | Canola | cytoskeleton, cytosol, peroxisome | 56.06 | 66.07 |
| AT5G54940.3 | Thale cress | cytosol, nucleus, peroxisome | 56.06 | 66.07 |
| Bra029001.1-P | Field mustard | cytosol | 53.79 | 63.39 |
| PGSC0003DMT400057195 | Potato | cytosol | 65.91 | 60.84 |
| CDY19877 | Canola | cytosol | 29.55 | 57.35 |
| PGSC0003DMT400049575 | Potato | cytosol | 47.73 | 55.75 |
| PGSC0003DMT400037400 | Potato | cytosol | 46.21 | 53.98 |
| PGSC0003DMT400065815 | Potato | cytosol | 46.21 | 53.98 |
| Os02t0151501-00 | Rice | cytosol, peroxisome | 21.97 | 50.88 |
| HORVU4Hr1G010890.1 | Barley | cytosol, peroxisome | 22.73 | 50.85 |
| KRH46184 | Soybean | vacuole | 58.33 | 49.04 |
| CDY52575 | Canola | cytosol, peroxisome | 56.06 | 46.84 |
| KRG98759 | Soybean | cytosol | 50.0 | 46.81 |
| Zm00001d004854_P001 | Maize | extracellular | 22.73 | 42.25 |
| Bra002944.1-P | Field mustard | cytosol | 55.3 | 31.47 |
| CDY17292 | Canola | cytosol | 55.3 | 31.47 |
| Zm00001d007787_P001 | Maize | mitochondrion | 24.24 | 25.6 |
| PGSC0003DMT400061864 | Potato | cytosol, nucleus, peroxisome | 46.21 | 25.1 |
Protein Annotations
| EntrezGene:102592812 | MapMan:17.4.1.1.1 | Gene3D:3.30.780.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003743 | GO:GO:0005488 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0008135 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR001950 | UniProt:M1DM84 |
| PFAM:PF01253 | EnsemblPlantsGene:PGSC0003DMG400040844 | PGSC:PGSC0003DMG400040844 | EnsemblPlants:PGSC0003DMT400091273 | PIRSF:PIRSF004499 | PFscan:PS50296 |
| PANTHER:PTHR10388 | PANTHER:PTHR10388:SF36 | SUPFAM:SSF55159 | InterPro:SUI1 | InterPro:SUI1_dom_sf | InterPro:SUI1_euk |
| TIGRFAMs:TIGR01160 | UniParc:UPI000295F454 | RefSeq:XP_006352509.1 | : | : | : |
Description
Translation initiation factor [Source:PGSC_GENE;Acc:PGSC0003DMG400040844]
Coordinates
chr10:+:1233702..1234100
Molecular Weight (calculated)
15133.1 Da
IEP (calculated)
9.108
GRAVY (calculated)
-0.605
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDTIFQIST SFDPFADAVD SDSDVQIPRS FDPFAESKDL GARGTKKEYV HIRVQQRNGK KSWTMIEGLK KDFSYEKILK DLKKEYCCNG TIIQDKELGK
101: VIQLQGDQRN NVSKFLVKAD IVKKEQIKVH GF
101: VIQLQGDQRN NVSKFLVKAD IVKKEQIKVH GF
001: MSDLEVQVPT AFDPFADANA EDSGAGTKEY VHIRVQQRNG RKSLTTVQGL KKEYSYSKIL KDLKKEFCCN GTVVQDSELG QVIQLQGDQR KNVSTFLVQA
101: GLVKKDNIKI HGF
101: GLVKKDNIKI HGF
Arabidopsis Description
Protein translation factor SUI1 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JV4]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.