CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

plastid 1
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43020	Canola	cytoskeleton, cytosol, peroxisome	70.89	100.0
Bra029001.1-P	Field mustard	cytosol	68.99	97.32
CDY19877	Canola	cytosol	39.87	92.65
AT5G54940.3	Thale cress	cytosol, nucleus, peroxisome	63.92	90.18
VIT_19s0090g00420.t01	Wine grape	cytosol, nucleus, peroxisome	60.76	85.71
Solyc07g064620.1.1	Tomato	cytosol	58.23	82.14
KRH14395	Soybean	cytosol	56.33	78.07
KRH73751	Soybean	cytosol	55.7	77.19
PGSC0003DMT400057195	Potato	cytosol	59.49	65.73
KRH46184	Soybean	vacuole	65.19	65.61
CDX97378	Canola	cytosol, peroxisome, plastid	44.3	61.95
CDY14282	Canola	cytosol, peroxisome, plastid	44.3	61.95
CDY08224	Canola	cytosol, peroxisome, plastid	43.04	59.13
CDY10602	Canola	cytosol, peroxisome, plastid	43.04	58.62
CDY02466	Canola	cytosol, peroxisome, plastid	43.04	58.62
CDY26128	Canola	cytosol, peroxisome, plastid	42.41	58.26
CDY08222	Canola	cytosol, peroxisome, plastid	42.41	58.26
PGSC0003DMT400091273	Potato	cytosol	46.84	56.06
Solyc10g006280.1.1	Tomato	cytosol	43.04	55.28
KRG98759	Soybean	cytosol	48.73	54.61
CDY17292	Canola	cytosol	69.62	47.41
Os02t0151501-00	Rice	cytosol, peroxisome	17.09	47.37
CDY08751	Canola	cytosol, peroxisome, plastid	27.85	44.44
Zm00001d004854_P001	Maize	extracellular	18.99	42.25
CDY46663	Canola	plastid	47.47	38.27
CDX92777	Canola	mitochondrion	46.84	36.45
CDY33072	Canola	nucleus	29.11	34.59
Zm00001d007787_P001	Maize	mitochondrion	20.89	26.4

Protein Annotations

MapMan:17.4.1.1.1	Gene3D:3.30.780.10	GO:A0A078INE8	UniProt:A0A078INE8	EnsemblPlants:CDY52575	ProteinID:CDY52575
ProteinID:CDY52575.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0005488
GO:GO:0006412	GO:GO:0006413	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00007286001	InterPro:IPR001950	PFAM:PF01253	PIRSF:PIRSF004499
PFscan:PS50296	PANTHER:PTHR10388	PANTHER:PTHR10388:SF36	SUPFAM:SSF55159	InterPro:SUI1	InterPro:SUI1_dom_sf
InterPro:SUI1_euk	TIGRFAMs:TIGR01160	UniParc:UPI0004EE27C2	:	:	:

Description

BnaC03g71830DBnaC03g71830D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078INE8]

Coordinates

chrLK033104:-:79314..80108

Molecular Weight (calculated)

18122.8 Da

IEP (calculated)

9.831

GRAVY (calculated)

-0.722

Length

158 amino acids

Sequence
(BLAST)

001: KKKTPISTHT YTLLSSPSIE KLNSKDFDRL QERTEHLPLQ SNQVYYMVEL DIQVPSAFDP FAEAQESDAP GTKEYIHVRI QQRNGKKSLT TVQGLKKAYS
101: YEKILKDLKK DFCCNGNVVQ DKELGKIIQL QGDQRKKVSH FLVQTGIAKK EQIKIHGF

Best Arabidopsis Sequence Match ( AT5G54940.1 )
(BLAST)

001: MVELDIQIPS AYDPFAEAKD SDAPGAKENI HIRIQQRNGK KSLTTVQGLK KEYSYERILK DLKKDFCCNG NVVQDKELGK IIQLQGDQRK KVSQFLVQTG
101: IAKKDQIKIH GF

Arabidopsis Description

AT5g54940/MBG8_21 [Source:UniProtKB/TrEMBL;Acc:Q9FFT6]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.