CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 2
nucleus 2
extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	nucleus, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g064620.1.1	Tomato	cytosol	62.42	87.5
VIT_19s0090g00420.t01	Wine grape	cytosol, nucleus, peroxisome	61.15	85.71
CDY43020	Canola	cytoskeleton, cytosol, peroxisome	61.15	85.71
KRH14395	Soybean	cytosol	61.78	85.09
Bra029001.1-P	Field mustard	cytosol	60.51	84.82
AT5G54940.3	Thale cress	cytosol, nucleus, peroxisome	59.87	83.93
KRH73751	Soybean	cytosol	59.87	82.46
CDY19877	Canola	cytosol	33.76	77.94
PGSC0003DMT400057195	Potato	cytosol	64.97	71.33
CDY52575	Canola	cytosol, peroxisome	65.61	65.19
KRG98759	Soybean	cytosol	56.05	62.41
KRH25862	Soybean	cytosol	43.95	61.06
KRH55654	Soybean	cytosol	43.95	61.06
KRH55655	Soybean	cytosol	43.95	61.06
KRH25407	Soybean	cytosol, peroxisome, plastid	42.68	59.29
KRH56096	Soybean	cytosol, peroxisome, plastid	42.04	58.41
PGSC0003DMT400091273	Potato	cytosol	49.04	58.33
Solyc10g006280.1.1	Tomato	cytosol	43.95	56.1
Os02t0151501-00	Rice	cytosol, peroxisome	19.75	54.39
HORVU4Hr1G010890.1	Barley	cytosol, peroxisome	20.38	54.24
Zm00001d004854_P001	Maize	extracellular	21.02	46.48
Bra002944.1-P	Field mustard	cytosol	61.15	41.38
CDY17292	Canola	cytosol	61.15	41.38
Zm00001d007787_P001	Maize	mitochondrion	22.93	28.8

Protein Annotations

EntrezGene:100787664	MapMan:17.4.1.1.1	Gene3D:3.30.780.10	EMBL:ACUP02005327	EnsemblPlantsGene:GLYMA_08G316700	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0005488	GO:GO:0006412	GO:GO:0006413
GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
InterPro:IPR001950	UniProt:K7LA44	EnsemblPlants:KRH46184	ProteinID:KRH46184	ProteinID:KRH46184.1	PFAM:PF01253
PIRSF:PIRSF004499	PFscan:PS50296	PANTHER:PTHR10388	PANTHER:PTHR10388:SF36	SUPFAM:SSF55159	InterPro:SUI1
InterPro:SUI1_dom_sf	InterPro:SUI1_euk	SignalP:SignalP-noTM	TIGRFAMs:TIGR01160	UniParc:UPI000296E609	:

Description

hypothetical protein

Coordinates

chr8:-:43648819..43650812

Molecular Weight (calculated)

18078.1 Da

IEP (calculated)

9.811

GRAVY (calculated)

-0.270

Length

157 amino acids

Sequence
(BLAST)

001: MRKPIFTFFI HIFLVCFPSL SKHLSFSSCR SYPCYLFPSL QQAKYMVDLE IQVPSAFDPF AEARESDAPG AKEYVHIRIQ QRNGKKSLTT VQGLKKEFSY
101: EKILKDLKKD FCCNGTVVQD KELGKIIQLQ GDQRKNVSHF LVQAGLVRKD QVKIHGF

Best Arabidopsis Sequence Match ( AT5G54940.1 )
(BLAST)

001: MVELDIQIPS AYDPFAEAKD SDAPGAKENI HIRIQQRNGK KSLTTVQGLK KEYSYERILK DLKKDFCCNG NVVQDKELGK IIQLQGDQRK KVSQFLVQTG
101: IAKKDQIKIH GF

Arabidopsis Description

AT5g54940/MBG8_21 [Source:UniProtKB/TrEMBL;Acc:Q9FFT6]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.