Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028297_P001 | Maize | nucleus | 37.05 | 27.76 |
| Zm00001d028296_P001 | Maize | mitochondrion | 7.97 | 4.17 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | UniProt:A0A1D6PFM5 | ProteinID:AQL08300.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF151 |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0008429BB8 | EnsemblPlantsGene:Zm00001d047999 | EnsemblPlants:Zm00001d047999_P001 | EnsemblPlants:Zm00001d047999_T001 |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
bHLH-transcription factor 9Putative HLH DNA-binding domain superfamily protein
Coordinates
chr9:-:147624186..147626585
Molecular Weight (calculated)
28075.5 Da
IEP (calculated)
7.600
GRAVY (calculated)
-0.467
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MMYSPPRTDP DREDEQCFAI GANLLSSLDH TMKFDEPIAF PMNNVGMQER VQLYNSTGDA QLSRNANTGK CSKGGKRKSS GGINSSLHSL VRKLEATVAL
101: FHRLHHTSLP LFHPTVHINV LLQDEARALL QREVSMECAD ENAAGAKRED YAHVRAKRGQ ATNSHSLAER FRREKINVRM KLLQDLVPGC NKITGKAMML
201: DEIINYVQSL QRQVERGVIW NEELRSIAPN AFASDTVAAV LDFCEISQDP S
101: FHRLHHTSLP LFHPTVHINV LLQDEARALL QREVSMECAD ENAAGAKRED YAHVRAKRGQ ATNSHSLAER FRREKINVRM KLLQDLVPGC NKITGKAMML
201: DEIINYVQSL QRQVERGVIW NEELRSIAPN AFASDTVAAV LDFCEISQDP S
001: MENELFMNAG VSHPPVMTSP SSSSAMLKWV SMETQPVDPS LSRNLFWEKS TEQSIFDSAL SSLVSSPTPS NSNFSVGGVG GENVIMRELI GKLGNIGDIY
101: GITASNGNSC YATPMSSPPP GSMMETKTTT PMAELSGDPG FAERAARFSC FGSRSFNSRT NSPFPINNEP PITTNEKMPR VSSSPVFKPL ASHVPAGESS
201: GELSRKRKTK SKQNSPSAVS SSKEIEEKED SDPKRCKKSE ENGDKTKSID PYKDYIHVRA RRGQATDSHS LAERVRREKI SERMKLLQDL VPGCNKVTGK
301: ALMLDEIINY VQSLQRQVEF LSMKLSSVNT RLDFNMDALL SKDIFPSSNN LMHHQQVLQL DSSAETLLGD HHNKNLQLNP DISSNNVINP LETSETRSFI
401: SHLPTLAHFT DSISQVSFSK TFFYHFSFLF LFNLKRS
101: GITASNGNSC YATPMSSPPP GSMMETKTTT PMAELSGDPG FAERAARFSC FGSRSFNSRT NSPFPINNEP PITTNEKMPR VSSSPVFKPL ASHVPAGESS
201: GELSRKRKTK SKQNSPSAVS SSKEIEEKED SDPKRCKKSE ENGDKTKSID PYKDYIHVRA RRGQATDSHS LAERVRREKI SERMKLLQDL VPGCNKVTGK
301: ALMLDEIINY VQSLQRQVEF LSMKLSSVNT RLDFNMDALL SKDIFPSSNN LMHHQQVLQL DSSAETLLGD HHNKNLQLNP DISSNNVINP LETSETRSFI
401: SHLPTLAHFT DSISQVSFSK TFFYHFSFLF LFNLKRS
Arabidopsis Description
BHLH62Transcription factor bHLH62 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRT2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.