Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER95218 | Sorghum | nucleus | 55.82 | 64.04 |
| Os03t0231950-01 | Rice | nucleus | 44.18 | 48.68 |
| HORVU3Hr1G057780.1 | Barley | nucleus | 43.58 | 47.1 |
| HORVU4Hr1G039390.1 | Barley | nucleus | 23.58 | 45.66 |
| TraesCS4B01G235700.1 | Wheat | nucleus | 42.69 | 44.14 |
| TraesCS4D01G237100.3 | Wheat | nucleus | 41.19 | 42.33 |
| TraesCS4A01G060200.2 | Wheat | extracellular, mitochondrion, nucleus, plastid, vacuole | 42.69 | 41.94 |
| Zm00001d047999_P001 | Maize | nucleus | 27.76 | 37.05 |
| Zm00001d028296_P001 | Maize | mitochondrion | 7.46 | 5.21 |
Protein Annotations
| EntrezGene:100381413 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | UniProt:A0A1D6JU83 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| ProteinID:ONL95387.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF151 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0008439980 | EnsemblPlantsGene:Zm00001d028297 | EnsemblPlants:Zm00001d028297_P001 | EnsemblPlants:Zm00001d028297_T001 | InterPro:bHLH_dom |
Description
bHLH-transcription factor 3Transcription factor bHLH62
Coordinates
chr1:+:29513368..29517513
Molecular Weight (calculated)
37612.6 Da
IEP (calculated)
6.583
GRAVY (calculated)
-0.472
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MMYSPPRTDP DREEEQCFSI GSNLLTSLDH YHTMDFDEPV VSPMTNAGMQ EGVQLYSSTG DAQLNRNMNT GKCLEDGKRK GSGEDSSSLR SLVRKLEASI
101: AFSHRITLPL FHPTVHVNVL LQGETSALQR EVSMECADEK AGDARAKRED YVHVRAKRGQ ATNSHSLAER FRREKINERM KLLQDLVPGC NKITGKAMML
201: DEIINYVQSL QRQIEFLSMK LSAIGPGLNC DLDLQDILCT QDASSAFPGY NLQTSNVHIN LYRASEEGFS HRNRIIPSPA NVHVTRNAQL SAFPQRGVIW
301: NEELCSIASD RNAAVLNFVR FFKSHFDIAD SMKVE
101: AFSHRITLPL FHPTVHVNVL LQGETSALQR EVSMECADEK AGDARAKRED YVHVRAKRGQ ATNSHSLAER FRREKINERM KLLQDLVPGC NKITGKAMML
201: DEIINYVQSL QRQIEFLSMK LSAIGPGLNC DLDLQDILCT QDASSAFPGY NLQTSNVHIN LYRASEEGFS HRNRIIPSPA NVHVTRNAQL SAFPQRGVIW
301: NEELCSIASD RNAAVLNFVR FFKSHFDIAD SMKVE
001: MGGESNEGGE MGFKHGDDES GGISRVGITS MPLYAKADPF FSSADWDPVV NAAAAGFSSS HYHPSMAMDN PGMSCFSHYQ PGSVSGFAAD MPASLLPFGD
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL
Arabidopsis Description
BHLH74Transcription factor bHLH74 [Source:UniProtKB/Swiss-Prot;Acc:Q6NKN9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.