Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G039390.1 | Barley | nucleus | 52.9 | 94.8 |
| TraesCS4A01G060200.2 | Wheat | extracellular, mitochondrion, nucleus, plastid, vacuole | 89.03 | 80.94 |
| TraesCS4B01G235700.1 | Wheat | nucleus | 83.55 | 79.94 |
| TraesCS4D01G237100.3 | Wheat | nucleus | 81.29 | 77.3 |
| Os03t0231950-01 | Rice | nucleus | 65.81 | 67.11 |
| EER95218 | Sorghum | nucleus | 55.16 | 58.56 |
| Zm00001d028297_P001 | Maize | nucleus | 47.1 | 43.58 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G057780.1 | EnsemblPlantsGene:HORVU3Hr1G057780 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF151 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000295EEB1 | UniProt:M0XXT5 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : | : |
Description
No Description!
Coordinates
chrchr3H:-:435079182..435081038
Molecular Weight (calculated)
33847.9 Da
IEP (calculated)
6.438
GRAVY (calculated)
-0.616
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSPPCTAPG SNGERSFASG AANPLALLDH AMDFDEHVLF PMHNAGMQDG VQFYNHTAGG SGTELSRNMS MEKGLKGGKR KGSGEGSSTM HSQEETGAMS
101: RREASMERAG EKEGDAASNR EDYVHIRAKR GQATNNHSLA ERFRREKINE RMKHLQDLVP GCNKITGKAM MLDEIINYVQ SLQRQVEFLS MKLSAVSPEL
201: NCDLDLQDIL CPQDARSAFP GYGQRLGNVH PNGSMFRASQ PGLSRPELYG NGIIIPDPAS VHHMARTAQL PAFPQRSIVW DEELRGIGPV AFPADAGTSS
301: LENSDSMKVE
101: RREASMERAG EKEGDAASNR EDYVHIRAKR GQATNNHSLA ERFRREKINE RMKHLQDLVP GCNKITGKAM MLDEIINYVQ SLQRQVEFLS MKLSAVSPEL
201: NCDLDLQDIL CPQDARSAFP GYGQRLGNVH PNGSMFRASQ PGLSRPELYG NGIIIPDPAS VHHMARTAQL PAFPQRSIVW DEELRGIGPV AFPADAGTSS
301: LENSDSMKVE
001: MSDKDEFAAK KKDLVNTPVD LYPPENPMLG PSPMMDSFRE TLWHDGGFNV HTDADTSFRD STGLFLQDTQ IPSGSKLDNG PLTDASKLVK ERSINNVSED
101: SQSSGGNGHD DAKCGQTSSK GFSSKKRKRI GKDCEEEEDK KQKDEQSPTS NANKTNSEKQ PSDSLKDGYI HMRARRGQAT NSHSLAERVR REKISERMKF
201: LQDLVPGCDK VTGKAVMLDE IINYVQSLQC QIEFLSMKLS AVNPVLDFNL ESLLAKDALQ SSAPTFPHNM SMLYPPVSYL SQTGFMQPNI SSMSLLSGGL
301: KRQETHGYES DHHNLVHMNH ETGTAPDHED TTADMKVEP
101: SQSSGGNGHD DAKCGQTSSK GFSSKKRKRI GKDCEEEEDK KQKDEQSPTS NANKTNSEKQ PSDSLKDGYI HMRARRGQAT NSHSLAERVR REKISERMKF
201: LQDLVPGCDK VTGKAVMLDE IINYVQSLQC QIEFLSMKLS AVNPVLDFNL ESLLAKDALQ SSAPTFPHNM SMLYPPVSYL SQTGFMQPNI SSMSLLSGGL
301: KRQETHGYES DHHNLVHMNH ETGTAPDHED TTADMKVEP
Arabidopsis Description
BHLH76Transcription factor bHLH76 [Source:UniProtKB/Swiss-Prot;Acc:Q9C670]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.