Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G237100.3 | Wheat | nucleus | 91.67 | 91.1 |
| HORVU3Hr1G057780.1 | Barley | nucleus | 79.94 | 83.55 |
| TraesCS4A01G060200.2 | Wheat | extracellular, mitochondrion, nucleus, plastid, vacuole | 86.42 | 82.11 |
| HORVU4Hr1G039390.1 | Barley | nucleus | 42.59 | 79.77 |
| Os03t0231950-01 | Rice | nucleus | 60.19 | 64.14 |
| EER95218 | Sorghum | nucleus | 48.46 | 53.77 |
| Zm00001d028297_P001 | Maize | nucleus | 44.14 | 42.69 |
| TraesCS4B01G235800.1 | Wheat | cytosol | 9.57 | 6.2 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G235700.1 | EnsemblPlantsGene:TraesCS4B01G235700 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF151 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 | SUPFAM:SSF47459 |
| TIGR:cd00083 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : | : | : |
Description
No Description!
Coordinates
chr4B:-:492214762..492216661
Molecular Weight (calculated)
35751.2 Da
IEP (calculated)
6.320
GRAVY (calculated)
-0.661
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MQHHTEIRYE AQLHKMYSPP CSAAGSNGER SFTAGANPLA LLDHAMDFDE HVLFPMHNAG MQDGVQFYNP TAGGTELSRN MSMEKGLKGG KRKGSGEGSS
101: MMHSQQEETG AMSQREVSME RAGEKEGDGA SNREDYVHIR AKRGQATNNH SLAERFRREK INERMKHLQD LVPGCNKITG KAMMLDEIIN YVQSLQRQVE
201: FLSMKLSAVS PELSCDLDLQ DILCPQDAHS TFPGYGQRLG NVHPNNNMYR ASQPGLSRPE LYGNGIIIPN PASVHMARTA QQLSAFPQRS ILWDEELGNV
301: GPAAFPSDVV GTSSLENSDS MKVE
101: MMHSQQEETG AMSQREVSME RAGEKEGDGA SNREDYVHIR AKRGQATNNH SLAERFRREK INERMKHLQD LVPGCNKITG KAMMLDEIIN YVQSLQRQVE
201: FLSMKLSAVS PELSCDLDLQ DILCPQDAHS TFPGYGQRLG NVHPNNNMYR ASQPGLSRPE LYGNGIIIPN PASVHMARTA QQLSAFPQRS ILWDEELGNV
301: GPAAFPSDVV GTSSLENSDS MKVE
001: MGGESNEGGE MGFKHGDDES GGISRVGITS MPLYAKADPF FSSADWDPVV NAAAAGFSSS HYHPSMAMDN PGMSCFSHYQ PGSVSGFAAD MPASLLPFGD
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL
Arabidopsis Description
BHLH74Transcription factor bHLH74 [Source:UniProtKB/Swiss-Prot;Acc:Q6NKN9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.