Factsheet for Os03t0231950-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
cytosol 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G039390.1	Barley	nucleus	38.49	67.63
HORVU3Hr1G057780.1	Barley	nucleus	67.11	65.81
EER95218	Sorghum	nucleus	60.2	62.67
TraesCS4A01G060200.2	Wheat	extracellular, mitochondrion, nucleus, plastid, vacuole	68.75	61.29
TraesCS4B01G235700.1	Wheat	nucleus	64.14	60.19
TraesCS4D01G237100.3	Wheat	nucleus	62.83	58.59
Zm00001d028297_P001	Maize	nucleus	48.68	44.18
Os03t0232000-01	Rice	cytosol	14.14	9.05

Protein Annotations

MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	EntrezGene:9267087	UniProt:A0A0P0VV20	ProteinID:BAS83112.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598
InterPro:IPR036638	EnsemblPlantsGene:Os03g0231950	EnsemblPlants:Os03t0231950-01	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565
PANTHER:PTHR12565:SF151	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI000393C064	RefSeq:XP_015631332.1	RefSeq:XP_015631333.1
RefSeq:XP_015631334.1	RefSeq:XP_015631335.1	InterPro:bHLH_dom	SEG:seg	:	:

Description

basic helix-loop-helix protein 088Similar to Helix-loop-helix DNA-binding domain containing protein, expressed. (Os03t0231950-01)

Coordinates

chr3:-:6980640..6982645

Molecular Weight (calculated)

33100.0 Da

IEP (calculated)

5.588

GRAVY (calculated)

-0.461

Length

304 amino acids

Sequence
(BLAST)

001: MYSPPCSAAA SSQGHCFAVG ANQLASLDLA MDFDEPILFP VHNASLQEGI QFYNPTGDTQ LSRNMSIDKC LKGSKRKGSG EGSSSLHSQE ETGEMPQREL
101: SMEHAGEKAG DADASREEYV HVRAKRGQAT NSHSLAERFR REKINERMKL LQDLVPGCNK ITGKAMMLDE IINYVQSLQR QVEFLSMKLS TISPELNSDL
201: DLQDILCSQD ARSAFLGCSP QLSNAHPNLY RAAQQCLSPP GLYGSVCVPN PADVHLARAG HLASFPQQRG LIWNEELRNI APAGFASDAA GTSSLENSDS
301: MKVE

Best Arabidopsis Sequence Match ( AT1G10120.1 )
(BLAST)

001: MGGESNEGGE MGFKHGDDES GGISRVGITS MPLYAKADPF FSSADWDPVV NAAAAGFSSS HYHPSMAMDN PGMSCFSHYQ PGSVSGFAAD MPASLLPFGD
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL

Arabidopsis Description

BHLH74Transcription factor bHLH74 [Source:UniProtKB/Swiss-Prot;Acc:Q6NKN9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.