Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038436.1-P | Field mustard | nucleus | 84.09 | 88.62 |
| CDY27132 | Canola | nucleus | 84.09 | 88.62 |
| CDY12358 | Canola | nucleus | 83.52 | 88.02 |
| AT2G04063.1 | Thale cress | cytosol | 45.45 | 71.43 |
Protein Annotations
| MapMan:35.2 | EntrezGene:840062 | ProteinID:AAG50730.1 | ProteinID:AAG60137.1 | ProteinID:AEE31388.1 | EMBL:AK228856 |
| ArrayExpress:AT1G31750 | EnsemblPlantsGene:AT1G31750 | RefSeq:AT1G31750 | TAIR:AT1G31750 | RefSeq:AT1G31750-TAIR-G | EnsemblPlants:AT1G31750.1 |
| TAIR:AT1G31750.1 | EMBL:BT025740 | GO:GO:0003674 | GO:GO:0008150 | RefSeq:NP_564381.1 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR31248 | PANTHER:PTHR31248:SF2 | UniProt:Q9C4Z8 | UniParc:UPI00000A27F6 | SEG:seg |
Description
At1g31750 [Source:UniProtKB/TrEMBL;Acc:Q9C4Z8]
Coordinates
chr1:-:11370585..11372197
Molecular Weight (calculated)
18395.8 Da
IEP (calculated)
10.836
GRAVY (calculated)
-1.109
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKDDHHEQD KRFFSHHNHH GHGYPPGAYP PPPQGAYPPP GGYPPQGYPP PPHGYPPAAY PPPPGAYPPA GYPGPSGPRP GFGGGVGGLI AGAATAAAAA
101: MGGHHAGHHG GYGHHGHGKY KRGFFGGGKY KRGKHSMFGG GKYKRGKHGM FGGKRSKHGM FGGKRGKGMF GRKKWK
101: MGGHHAGHHG GYGHHGHGKY KRGFFGGGKY KRGKHSMFGG GKYKRGKHGM FGGKRSKHGM FGGKRGKGMF GRKKWK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.