Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 3
- golgi 3
- extracellular 3
- mitochondrion 2
- cytosol 2
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G31750.1 | Thale cress | nucleus | 71.43 | 45.45 |
| Bra038436.1-P | Field mustard | nucleus | 62.5 | 41.92 |
| CDY12358 | Canola | nucleus | 62.5 | 41.92 |
| CDY27132 | Canola | nucleus | 62.5 | 41.92 |
Protein Annotations
| ArrayExpress:AT2G04063 | EnsemblPlants:AT2G04063.1 | EnsemblPlantsGene:AT2G04063 | EntrezGene:814941 | GO:GO:0008150 | ProteinID:AAM15438.1 |
| ProteinID:AEC05794.1 | RefSeq:AT2G04063 | RefSeq:AT2G04063-TAIR-G | RefSeq:NP_178494.1 | SEG:seg | TAIR:AT2G04063 |
| TAIR:AT2G04063.1 | TMHMM:TMhelix | Unigene:At.66156 | UniParc:UPI00000A874C | UniProt:Q8S8A8 | MapMan:35.2 |
Description
Glycine-rich protein [Source:UniProtKB/TrEMBL;Acc:Q8S8A8]
Coordinates
chr2:-:1349758..1350177
Molecular Weight (calculated)
11727.5 Da
IEP (calculated)
11.415
GRAVY (calculated)
-0.399
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLVQFRDIS IINNVGLGLG GGVGGLIAGA ATAVVAAMGG HHVGHRAGYE HHNHGKYIRG LLGGGKYKRG KQSIGGGNYK CGKHGMFGGK RGKHDMFGGK
101: RGKGMFGQRK WK
101: RGKGMFGQRK WK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.