Factsheet for Bra038436.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27132	Canola	nucleus	100.0	100.0
CDY12358	Canola	nucleus	99.4	99.4
AT1G31750.1	Thale cress	nucleus	88.62	84.09
AT2G04063.1	Thale cress	cytosol	41.92	62.5

Protein Annotations

EnsemblPlants:Bra038436.1	EnsemblPlants:Bra038436.1-P	EnsemblPlantsGene:Bra038436	PANTHER:PTHR31248	SEG:seg	UniParc:UPI0002546757
UniProt:M4FBH0	MapMan:35.2	:	:	:	:

Description

AT1G31750 (E=2e-008) | proline-rich family protein

Coordinates

chrA08:+:8743209..8744568

Molecular Weight (calculated)

17548.8 Da

IEP (calculated)

10.732

GRAVY (calculated)

-1.137

Length

167 amino acids

Sequence
(BLAST)

001: MGKDKHHEQD KGFFSHHNHP GHGYPPGAYP PPPPGAYPPP HGYPQQGYPP QGYPPQGYPP AAYPPPPGAY PPAGYPGPHR PGLGGGVGGL IAGAATAAAA
101: AMGSHHAGHH GGYGHHHGGK YKKGFFGGGK YKRGKHSMFG GKHKRGKHGM FGGKRGKHGM FGRRKWK

Best Arabidopsis Sequence Match ( AT1G31750.1 )
(BLAST)

001: MGKDDHHEQD KRFFSHHNHH GHGYPPGAYP PPPQGAYPPP GGYPPQGYPP PPHGYPPAAY PPPPGAYPPA GYPGPSGPRP GFGGGVGGLI AGAATAAAAA
101: MGGHHAGHHG GYGHHGHGKY KRGFFGGGKY KRGKHSMFGG GKYKRGKHGM FGGKRSKHGM FGGKRGKGMF GRKKWK

Arabidopsis Description

At1g31750 [Source:UniProtKB/TrEMBL;Acc:Q9C4Z8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.