Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47843 | Canola | nucleus | 62.9 | 67.83 |
| Bra040918.1-P | Field mustard | nucleus | 62.1 | 66.96 |
| CDY62025 | Canola | nucleus | 62.1 | 66.96 |
| AT5G42060.1 | Thale cress | cytosol | 40.32 | 54.35 |
Protein Annotations
| MapMan:35.2 | EntrezGene:842757 | ProteinID:AAF19669.1 | ProteinID:AEE34246.1 | EMBL:AK175745 | ArrayExpress:AT1G64490 |
| EnsemblPlantsGene:AT1G64490 | RefSeq:AT1G64490 | TAIR:AT1G64490 | RefSeq:AT1G64490-TAIR-G | EnsemblPlants:AT1G64490.1 | TAIR:AT1G64490.1 |
| EMBL:AY084856 | EMBL:BT024574 | InterPro:DEK_C | GO:GO:0003674 | GO:GO:0003713 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005667 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0060261 | RefSeq:NP_564835.1 |
| PFAM:PF08766 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PANTHER:PTHR13215 | PANTHER:PTHR13215:SF6 | UniProt:Q9SGW6 | UniParc:UPI000005EC7D | SEG:seg | : |
Description
At1g64490 [Source:UniProtKB/TrEMBL;Acc:Q9SGW6]
Coordinates
chr1:+:23952133..23952839
Molecular Weight (calculated)
14189.1 Da
IEP (calculated)
6.065
GRAVY (calculated)
-0.848
Length
124 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEEEARQVV IDNDLKKKIK ETVKKILKRS SLLEITEIKA REEASSELNL DLSRDPYKII VREAVDSFIE KAIMTIDTEM GKLHTQIVED VDGEVTENAT
101: KTTTKKKKKK KAKKKVEEEE SSPA
101: KTTTKKKKKK KAKKKVEEEE SSPA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.