Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040918.1-P | Field mustard | nucleus | 58.7 | 46.96 |
| CDY47843 | Canola | nucleus | 58.7 | 46.96 |
| CDY62025 | Canola | nucleus | 57.61 | 46.09 |
| AT1G64490.1 | Thale cress | nucleus | 54.35 | 40.32 |
Protein Annotations
| MapMan:35.1 | EntrezGene:834211 | UniProt:A0A178UTD6 | ProteinID:AED94761.1 | ArrayExpress:AT5G42060 | EnsemblPlantsGene:AT5G42060 |
| RefSeq:AT5G42060 | TAIR:AT5G42060 | RefSeq:AT5G42060-TAIR-G | EnsemblPlants:AT5G42060.1 | TAIR:AT5G42060.1 | EMBL:AY072311 |
| EMBL:AY114547 | Unigene:At.30192 | ProteinID:BAB08439.1 | InterPro:DEK_C | GO:GO:0003674 | GO:GO:0003713 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0005667 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016592 | GO:GO:0060261 | RefSeq:NP_199021.1 | ProteinID:OAO96112.1 | PFAM:PF08766 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PANTHER:PTHR13215 | PANTHER:PTHR13215:SF6 | UniProt:Q9FHX8 | UniParc:UPI00000AB702 | : |
Description
Mediator-associated protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHX8]
Coordinates
chr5:-:16818388..16818955
Molecular Weight (calculated)
10702.1 Da
IEP (calculated)
5.344
GRAVY (calculated)
-0.510
Length
92 amino acids
Sequence
(BLAST)
(BLAST)
1: MEEVAREEVE IDKDLRRKIK KTVKKILESS NLYKITEIKA REEASLKLDL DLSQDPYKVI VKEEVENFLE EAVKLIGNKL AMLPKRIEST SI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.