Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G38940.1 | Thale cress | cytosol | 36.39 | 36.49 |
| CDX74275 | Canola | cytosol | 32.08 | 33.81 |
| Bra001029.1-P | Field mustard | cytosol | 31.81 | 33.52 |
| CDX91971 | Canola | cytosol | 32.88 | 29.9 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | EntrezGene:820215 | UniProt:A0A178V9G7 | ProteinID:AAF76352.1 | ProteinID:AAG51385.1 |
| ProteinID:AEE74918.1 | ArrayExpress:AT3G10510 | EnsemblPlantsGene:AT3G10510 | RefSeq:AT3G10510 | TAIR:AT3G10510 | RefSeq:AT3G10510-TAIR-G |
| EnsemblPlants:AT3G10510.1 | TAIR:AT3G10510.1 | Unigene:At.65076 | InterPro:F-box-like_dom_sf | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | RefSeq:NP_187662.1 | ProteinID:OAP02536.1 |
| PANTHER:PTHR24414 | PANTHER:PTHR24414:SF23 | UniProt:Q9CAE9 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | UniParc:UPI00000A13F6 |
Description
Putative F-box/kelch-repeat protein At3g10510 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAE9]
Coordinates
chr3:-:3274220..3275551
Molecular Weight (calculated)
42326.2 Da
IEP (calculated)
4.924
GRAVY (calculated)
-0.142
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSEDEKEKT PPSVMTSIPD DVIMECIAPR VPRYNHSMLS LVSKQFRSLV ASPRLYKTRS LLGCTEDCVY VLIEDCILEV ARWYSLNRRT KRNMPGTVEN
101: RLVLISSLPP MPTAASYVVV GSNIFVMGGR YDWNVEEWEA QPPSSIALCI DCRTHTTRLV ADMPVGLMTN VSKVIDEKIY IVGRVWASAT IVEFDLRTEK
201: WADGTKPGWE ADDRWLTSLS TTAGRGPSSF ENNCDHKLME DILMDKEEIK HYHLFDNECV MGNILYVYDR HKYILRTYDP KQRTWGVVKG LEKLPLGGDE
301: SYIVSRGKML ILFLIVVLEY DDDASFQKRE LWCAEITVER REEGEIWGKV ECCDLLLEGG LIIGSCLVVT L
101: RLVLISSLPP MPTAASYVVV GSNIFVMGGR YDWNVEEWEA QPPSSIALCI DCRTHTTRLV ADMPVGLMTN VSKVIDEKIY IVGRVWASAT IVEFDLRTEK
201: WADGTKPGWE ADDRWLTSLS TTAGRGPSSF ENNCDHKLME DILMDKEEIK HYHLFDNECV MGNILYVYDR HKYILRTYDP KQRTWGVVKG LEKLPLGGDE
301: SYIVSRGKML ILFLIVVLEY DDDASFQKRE LWCAEITVER REEGEIWGKV ECCDLLLEGG LIIGSCLVVT L
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.