Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007741.1-P | Field mustard | cytosol | 48.55 | 75.28 |
| CDY11472 | Canola | cytosol | 48.55 | 75.28 |
| CDX76696 | Canola | cytosol | 47.83 | 74.16 |
| CDY53713 | Canola | cytosol | 47.83 | 70.97 |
| KRH32079 | Soybean | cytosol | 25.36 | 58.33 |
| CDX93908 | Canola | extracellular | 50.72 | 46.36 |
| AT3G22942.1 | Thale cress | cytosol, nucleus, plastid | 33.33 | 46.0 |
| KRH71357 | Soybean | cytosol | 36.23 | 45.87 |
| Os03t0635100-01 | Rice | cytosol | 29.71 | 44.09 |
| EER91202 | Sorghum | cytosol | 30.43 | 42.86 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 31.16 | 41.75 |
| TraesCS5A01G377700.1 | Wheat | cytosol | 28.99 | 40.82 |
| TraesCS5B01G381300.1 | Wheat | cytosol | 28.99 | 40.82 |
| TraesCS5D01G387700.2 | Wheat | cytosol | 28.99 | 40.0 |
| GSMUA_Achr9P10650_001 | Banana | cytosol | 29.71 | 39.05 |
| Zm00001d033287_P001 | Maize | cytosol, nucleus, plastid | 26.81 | 25.87 |
Protein Annotations
| MapMan:26.8.1.1.2.3 | MapMan:27.6.2.3 | EntrezGene:825517 | ProteinID:AAG45960.1 | ProteinID:AEE80479.1 | ProteinID:AEE80480.1 |
| EMBL:AF283673 | Symbol:AGG1 | EMBL:AK175815 | ProteinID:ANM63533.1 | ArrayExpress:AT3G63420 | EnsemblPlantsGene:AT3G63420 |
| RefSeq:AT3G63420 | TAIR:AT3G63420 | RefSeq:AT3G63420-TAIR-G | EnsemblPlants:AT3G63420.3 | EMBL:BT024540 | ProteinID:CAB87795.1 |
| ncoils:Coil | InterPro:G-protein_gamma-like_dom | GO:GO:0000139 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0004871 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005834 | GO:GO:0005886 | GO:GO:0006464 | GO:GO:0006810 |
| GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007186 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009791 |
| GO:GO:0009817 | GO:GO:0009845 | GO:GO:0009987 | GO:GO:0010541 | GO:GO:0016020 | GO:GO:0018342 |
| GO:GO:0018345 | GO:GO:0019538 | GO:GO:0048527 | InterPro:IPR015898 | RefSeq:NP_001325615.1 | RefSeq:NP_567147.1 |
| RefSeq:NP_850741.1 | PFAM:PF00631 | PANTHER:PTHR35129 | PANTHER:PTHR35129:SF2 | SMART:SM01224 | UniParc:UPI00000A808C |
| SEG:seg | : | : | : | : | : |
Description
AGG1Ggamma-subunit 1 [Source:TAIR;Acc:AT3G63420]
Coordinates
chr3:+:23417249..23418981
Molecular Weight (calculated)
15794.9 Da
IEP (calculated)
4.956
GRAVY (calculated)
-0.576
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGKSRFESE RERLRRQFKL VRTKTRLSLT LSDLRPASER MREETVVYEQ EESVSHGGGK HRILAELARV EQEVAFLEKE LKEVENTDIV STVCEELLSV
101: IEKGPDPLLP LTNGPLNLGW DRWFEGPNGG EGCRCLIL
101: IEKGPDPLLP LTNGPLNLGW DRWFEGPNGG EGCRCLIL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.