CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32079	Soybean	cytosol	52.29	95.0
Bra007741.1-P	Field mustard	cytosol	46.79	57.3
CDY11472	Canola	cytosol	46.79	57.3
CDX76696	Canola	cytosol	45.87	56.18
EER91202	Sorghum	cytosol	48.62	54.08
Os03t0635100-01	Rice	cytosol	45.87	53.76
CDY53713	Canola	cytosol	43.12	50.54
KRH34355	Soybean	nucleus	48.62	50.0
GSMUA_Achr10P...	Banana	cytosol, plastid	46.79	49.51
KRG92444	Soybean	nucleus	47.71	49.06
TraesCS5A01G377700.1	Wheat	cytosol	44.04	48.98
TraesCS5D01G387700.2	Wheat	cytosol	44.04	48.0
TraesCS5B01G381300.1	Wheat	cytosol	43.12	47.96
GSMUA_Achr9P10650_001	Banana	cytosol	44.04	45.71
KRG88883	Soybean	cytosol	24.77	40.3
AT3G63420.3	Thale cress	cytosol	45.87	36.23
CDX93908	Canola	extracellular	46.79	33.77
Zm00001d033287_P001	Maize	cytosol, nucleus, plastid	39.45	30.07
KRH16102	Soybean	nucleus	33.03	28.57
KRH04991	Soybean	cytosol	33.03	27.48

Protein Annotations

MapMan:26.8.1.1.2.3	MapMan:27.6.2.3	EMBL:ACUP02000894	ncoils:Coil	InterPro:G-protein_gamma-like_dom	EnsemblPlantsGene:GLYMA_02G143500
GO:GO:0003674	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005834
GO:GO:0005886	GO:GO:0007154	GO:GO:0007165	GO:GO:0007186	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	UniProt:I1JF60	InterPro:IPR015898	EnsemblPlants:KRH71357	ProteinID:KRH71357	ProteinID:KRH71357.1
PFAM:PF00631	PANTHER:PTHR35129	PANTHER:PTHR35129:SF2	SMART:SM01224	UniParc:UPI0002336BF9	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:14814133..14819756

Molecular Weight (calculated)

12180.3 Da

IEP (calculated)

4.177

GRAVY (calculated)

-0.438

Length

109 amino acids

Sequence
(BLAST)

001: MASETASSAD EETAVVVVSA AGAGGTDKRG KHRILAELKR LDQDSMFLQE ELEELEKTEN VSTICTELLQ NMESRPDPLL PEVHGPVNLL WDRWFEGPQD
101: PQACRCWIL

Best Arabidopsis Sequence Match ( AT3G63420.3 )
(BLAST)

001: MEGKSRFESE RERLRRQFKL VRTKTRLSLT LSDLRPASER MREETVVYEQ EESVSHGGGK HRILAELARV EQEVAFLEKE LKEVENTDIV STVCEELLSV
101: IEKGPDPLLP LTNGPLNLGW DRWFEGPNGG EGCRCLIL

Arabidopsis Description

AGG1Ggamma-subunit 1 [Source:TAIR;Acc:AT3G63420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.