Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G22942.1 | KRH24483 | AT4G34460.1 | 11513956 |
| AT3G22942.1 | KRH29472 | AT4G34460.1 | 11513956 |
| AT3G22942.1 | KRH51535 | AT4G34460.1 | 11513956 |
| AT3G22942.1 | KRH60850 | AT4G34460.1 | 11513956 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH34355 | Soybean | nucleus | 92.45 | 92.45 |
| Solyc09g082940.2.1 | Tomato | cytosol, mitochondrion, nucleus, plastid | 63.21 | 67.68 |
| PGSC0003DMT400015571 | Potato | cytosol, mitochondrion, nucleus, plastid | 63.21 | 67.68 |
| Bra001894.1-P | Field mustard | nucleus | 62.26 | 65.35 |
| CDX92967 | Canola | nucleus | 62.26 | 65.35 |
| CDX94882 | Canola | nucleus | 62.26 | 65.35 |
| AT3G22942.1 | Thale cress | cytosol, nucleus, plastid | 60.38 | 64.0 |
| PGSC0003DMT400041948 | Potato | cytosol, mitochondrion, nucleus | 54.72 | 63.04 |
| CDY67558 | Canola | nucleus | 59.43 | 63.0 |
| Bra023782.1-P | Field mustard | nucleus | 58.49 | 61.39 |
| CDY35482 | Canola | nucleus | 58.49 | 61.39 |
| VIT_05s0020g04450.t01 | Wine grape | plastid | 59.43 | 60.0 |
| KRH32079 | Soybean | cytosol | 33.96 | 60.0 |
| KRH71357 | Soybean | cytosol | 49.06 | 47.71 |
| KRG88883 | Soybean | cytosol | 25.47 | 40.3 |
| KRH16102 | Soybean | nucleus | 33.02 | 27.78 |
| KRH04991 | Soybean | cytosol | 33.02 | 26.72 |
Protein Annotations
| EntrezGene:100812916 | MapMan:26.8.1.1.2.3 | MapMan:27.6.2.3 | EMBL:ACUP02012759 | ncoils:Coil | InterPro:G-protein_gamma-like_dom |
| EnsemblPlantsGene:GLYMA_20G211400 | GO:GO:0003674 | GO:GO:0004871 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005834 | GO:GO:0005886 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007186 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | InterPro:IPR015898 | UniProt:K7N4U0 | EnsemblPlants:KRG92444 | ProteinID:KRG92444 |
| ProteinID:KRG92444.1 | PFAM:PF00631 | PANTHER:PTHR32378 | PANTHER:PTHR32378:SF10 | SMART:SM01224 | UniParc:UPI000233DC46 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr20:-:44804912..44809226
Molecular Weight (calculated)
12054.3 Da
IEP (calculated)
5.683
GRAVY (calculated)
-0.687
Length
106 amino acids
Sequence
(BLAST)
(BLAST)
001: MESGGPESAS PMTHRVQSLS SADTRGKHRI HAELKRLEQE ARFLEEELEQ LERMEKASTS CKIMLINVET KPDPLLPSSV GPLSPTWDRW FEGPQDSKSC
101: CRCWIL
101: CRCWIL
1: MEAGSSNSSG QLSGRVVDTR GKHRIQAELK RLEQEARFLE EELEQLEKMD NASASCKEFL DSVDSKPDPL LPETTGPVNA TWDQWFEGPK EAKRCGCSIL
Arabidopsis Description
GG2AtGG2 [Source:UniProtKB/TrEMBL;Acc:A0A178V974]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.