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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 2
  • plastid 1
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400001906

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G22942.1 PGSC0003DMT400001906 AT4G34460.1 11513956
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc09g082940.2.1 Tomato cytosol, mitochondrion, nucleus, plastid 98.99 98.99
PGSC0003DMT400041948 Potato cytosol, mitochondrion, nucleus 69.7 75.0
KRH34355 Soybean nucleus 68.69 64.15
VIT_05s0020g04450.t01 Wine grape plastid 67.68 63.81
KRG92444 Soybean nucleus 67.68 63.21
Bra001894.1-P Field mustard nucleus 62.63 61.39
CDX92967 Canola nucleus 62.63 61.39
CDX94882 Canola nucleus 62.63 61.39
AT3G22942.1 Thale cress cytosol, nucleus, plastid 60.61 60.0
CDY67558 Canola nucleus 57.58 57.0
Bra023782.1-P Field mustard nucleus 57.58 56.44
CDY35482 Canola nucleus 57.58 56.44
PGSC0003DMT400082780 Potato cytosol 37.37 29.37
Protein Annotations
EntrezGene:102581265MapMan:26.8.1.1.2.3MapMan:27.6.2.3ncoils:CoilInterPro:G-protein_gamma-like_domGO:GO:0003674
GO:GO:0004871GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005834GO:GO:0005886
GO:GO:0007154GO:GO:0007165GO:GO:0007186GO:GO:0008150GO:GO:0009987GO:GO:0016020
InterPro:IPR015898UniProt:M1A677PFAM:PF00631EnsemblPlantsGene:PGSC0003DMG400006078PGSC:PGSC0003DMG400006078EnsemblPlants:PGSC0003DMT400015571
PANTHER:PTHR32378PANTHER:PTHR32378:SF10SMART:SM01224UniParc:UPI00029694B1RefSeq:XP_006362154.1SEG:seg
Description
GTP binding protein gamma subunit [Source:PGSC_GENE;Acc:PGSC0003DMG400006078]
Coordinates
chr9:+:54948486..54954756
Molecular Weight (calculated)
11230.2 Da
IEP (calculated)
4.755
GRAVY (calculated)
-0.666
Length
99 amino acids
Sequence
(BLAST)
1: MQSESSEQVR SVVAAADTRG KHRISAELKR LEQETRFLEE ELELLDKMEK ASAACKEMLS NVETRPDPLL PVTHGPTNPS WDRWFEGAQD ASGCRCWIL
Best Arabidopsis Sequence Match ( AT3G22942.1 )
(BLAST)
1: MEAGSSNSSG QLSGRVVDTR GKHRIQAELK RLEQEARFLE EELEQLEKMD NASASCKEFL DSVDSKPDPL LPETTGPVNA TWDQWFEGPK EAKRCGCSIL
Arabidopsis Description
GG2AtGG2 [Source:UniProtKB/TrEMBL;Acc:A0A178V974]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.