Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11472 | Canola | cytosol | 93.26 | 93.26 |
| CDY53713 | Canola | cytosol | 77.53 | 74.19 |
| KRH32079 | Soybean | cytosol | 39.33 | 58.33 |
| CDX92967 | Canola | nucleus | 56.18 | 49.51 |
| CDX94882 | Canola | nucleus | 56.18 | 49.51 |
| Os03t0635100-01 | Rice | cytosol | 51.69 | 49.46 |
| CDX93908 | Canola | extracellular | 82.02 | 48.34 |
| AT3G63420.3 | Thale cress | cytosol | 74.16 | 47.83 |
| EER91202 | Sorghum | cytosol | 51.69 | 46.94 |
| TraesCS5A01G377700.1 | Wheat | cytosol | 50.56 | 45.92 |
| KRH71357 | Soybean | cytosol | 56.18 | 45.87 |
| CDY67558 | Canola | nucleus | 50.56 | 45.0 |
| TraesCS5D01G387700.2 | Wheat | cytosol | 50.56 | 45.0 |
| TraesCS5B01G381300.1 | Wheat | cytosol | 49.44 | 44.9 |
| CDY35482 | Canola | nucleus | 50.56 | 44.55 |
| GSMUA_Achr9P10650_001 | Banana | cytosol | 48.31 | 40.95 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 47.19 | 40.78 |
| Zm00001d033287_P001 | Maize | cytosol, nucleus, plastid | 46.07 | 28.67 |
Protein Annotations
| EnsemblPlants:CDX76696 | EnsemblPlantsGene:GSBRNA2T00127180001 | GO:A0A078CHI8 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007186 |
| GO:GO:0008150 | GO:GO:0009987 | InterPro:G-protein_gamma-like_dom | InterPro:IPR015898 | ncoils:Coil | PANTHER:PTHR35129 |
| PANTHER:PTHR35129:SF2 | PFAM:PF00631 | ProteinID:CDX76696 | ProteinID:CDX76696.1 | SEG:seg | SMART:SM01224 |
| UniParc:UPI0004EDE0A4 | MapMan:26.8.1.1.2.3 | MapMan:27.6.2.3 | : | : | : |
Description
BnaC08g32820D
Coordinates
chrLK031808:+:597597..598932
Molecular Weight (calculated)
10073.0 Da
IEP (calculated)
4.015
GRAVY (calculated)
-0.308
Length
89 amino acids
Sequence
(BLAST)
(BLAST)
1: MELEDGDARG KHRILAELGR VEEEVRFLEK ELEELGQTDI VSTVCEELLF LIEKAPDPLL PLTNGPLNLG WDRWFEGPDG GDGCRCFML
001: MEGKSRFESE RERLRRQFKL VRTKTRLSLT LSDLRPASER MREETVVYEQ EESVSHGGGK HRILAELARV EQEVAFLEKE LKEVENTDIV STVCEELLSV
101: IEKGPDPLLP LTNGPLNLGW DRWFEGPNGG EGCRCLIL
101: IEKGPDPLLP LTNGPLNLGW DRWFEGPNGG EGCRCLIL
Arabidopsis Description
AGG1Ggamma-subunit 1 [Source:TAIR;Acc:AT3G63420]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.