CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
mitochondrion 1
extracellular 4
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	extracellular, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	extracellular
PProwler:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76696	Canola	cytosol	48.34	82.02
CDY11472	Canola	cytosol	48.34	82.02
CDY53713	Canola	cytosol	47.68	77.42
KRH32079	Soybean	cytosol	22.52	56.67
AT3G63420.3	Thale cress	cytosol	46.36	50.72
CDX92967	Canola	nucleus	33.77	50.49
CDX94882	Canola	nucleus	33.77	50.49
Os03t0635100-01	Rice	cytosol	29.8	48.39
CDY67558	Canola	nucleus	31.13	47.0
KRH71357	Soybean	cytosol	33.77	46.79
CDY35482	Canola	nucleus	31.13	46.53
EER91202	Sorghum	cytosol	29.8	45.92
TraesCS5A01G377700.1	Wheat	cytosol	29.8	45.92
TraesCS5D01G387700.2	Wheat	cytosol	29.8	45.0
TraesCS5B01G381300.1	Wheat	cytosol	29.14	44.9
GSMUA_Achr10P...	Banana	cytosol, plastid	28.48	41.75
GSMUA_Achr9P10650_001	Banana	cytosol	28.48	40.95
Zm00001d033287_P001	Maize	cytosol, nucleus, plastid	26.49	27.97

Protein Annotations

MapMan:26.8.1.1.2.3	MapMan:27.6.2.3	GO:A0A078E365	EnsemblPlants:CDX93908	ProteinID:CDX93908	ProteinID:CDX93908.1
ncoils:Coil	InterPro:G-protein_gamma-like_dom	GO:GO:0003674	GO:GO:0004871	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005834	GO:GO:0005886	GO:GO:0007154	GO:GO:0007165	GO:GO:0007186
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	EnsemblPlantsGene:GSBRNA2T00156726001	InterPro:IPR015898	PFAM:PF00631
PANTHER:PTHR35129	PANTHER:PTHR35129:SF2	SMART:SM01224	UniParc:UPI0004EE3C25	:	:

Description

BnaC04g20670D

Coordinates

chrLK031878:-:610581..611841

Molecular Weight (calculated)

16802.5 Da

IEP (calculated)

4.630

GRAVY (calculated)

0.105

Length

151 amino acids

Sequence
(BLAST)

001: MCIRFELLLG SHTNPHGSCA LLNKLITLFW ALLISENNSL VVRRRGSIVP IIRAEILEEK EQEAASVGDA RGKHRILAEL GRVEQEVRFL EKELEALGQT
101: DIVSTVCEEL LCVIEEAPDP LLPLTKGPLN LGWDRWFEGP NGGEGCICFI L

Best Arabidopsis Sequence Match ( AT3G63420.3 )
(BLAST)

001: MEGKSRFESE RERLRRQFKL VRTKTRLSLT LSDLRPASER MREETVVYEQ EESVSHGGGK HRILAELARV EQEVAFLEKE LKEVENTDIV STVCEELLSV
101: IEKGPDPLLP LTNGPLNLGW DRWFEGPNGG EGCRCLIL

Arabidopsis Description

AGG1Ggamma-subunit 1 [Source:TAIR;Acc:AT3G63420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.