Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85057 | Canola | nucleus | 70.69 | 78.85 |
| Bra008714.1-P | Field mustard | cytosol | 58.62 | 73.91 |
| CDX69543 | Canola | cytosol | 58.62 | 73.91 |
| Bra023510.1-P | Field mustard | cytosol | 74.14 | 71.67 |
| CDX85560 | Canola | cytosol | 74.14 | 71.67 |
| CDX91004 | Canola | cytosol | 74.14 | 71.67 |
| Bra006288.1-P | Field mustard | cytosol, nucleus, plastid | 70.69 | 71.3 |
| CDX78617 | Canola | cytosol, nucleus, plastid | 70.69 | 71.3 |
Protein Annotations
| MapMan:35.2 | EntrezGene:831371 | UniProt:A0A178UEH5 | ProteinID:AED92126.1 | ProteinID:AED92127.1 | EMBL:AK119079 |
| ArrayExpress:AT5G15190 | EnsemblPlantsGene:AT5G15190 | RefSeq:AT5G15190 | TAIR:AT5G15190 | RefSeq:AT5G15190-TAIR-G | EnsemblPlants:AT5G15190.1 |
| TAIR:AT5G15190.1 | EMBL:BT004712 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 | RefSeq:NP_197023.2 | RefSeq:NP_850823.1 | ProteinID:OAO92040.1 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0004507 | PO:PO:0007115 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | UniProt:Q8GW49 |
| UniParc:UPI000000C440 | SEG:seg | : | : | : | : |
Description
At5g15190 [Source:UniProtKB/TrEMBL;Acc:Q8GW49]
Coordinates
chr5:-:4932708..4933620
Molecular Weight (calculated)
13278.8 Da
IEP (calculated)
5.976
GRAVY (calculated)
-0.716
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MMTMGGREAE SWPEMEAIAR KMVEEVETES SGSSEAETES PRSVGRWITA KEKVHNQVLK IREEDLCVLV EDKVTNPEDR RYLRPRRFNL FLISRQNLPC
101: SPLSGKGRSV NVVQTQ
101: SPLSGKGRSV NVVQTQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.