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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:
  • nucleus 2
  • extracellular 2
  • plastid 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi, plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
MultiLoc:extracellular
Plant-mPloc:nucleus, plastid
PProwler:secretory
WoLF PSORT:golgi
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003394.1-P Field mustard plastid 83.02 78.57
Bra004803.1-P Field mustard plasma membrane 66.04 64.22
AT3G59900.1 Thale cress plastid 72.64 59.23
Bra037667.1-P Field mustard cytosol, peroxisome, plastid 65.09 51.88
Bra000340.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 60.38 46.72
Protein Annotations
EnsemblPlants:Bra007491.1EnsemblPlants:Bra007491.1-PEnsemblPlantsGene:Bra007491GO:GO:0005575GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0040007GO:GO:0046622InterPro:ARGOS/ARLPANTHER:PTHR36023PANTHER:PTHR36023:SF3
SEG:segTMHMM:TMhelixUniParc:UPI0002542F4AUniProt:M4CTE8MapMan:35.1:
Description
AT3G59900 (E=4e-018) ARGOS | ARGOS (AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE)
Coordinates
chrA09:+:29470544..29470864
Molecular Weight (calculated)
11878.2 Da
IEP (calculated)
10.568
GRAVY (calculated)
0.396
Length
106 amino acids
Sequence
(BLAST)
001: MDVGERNNWK NVNFNRPPAK VLENSKHELR RTQKRLMTPA SYFSLESLVL MVGLTASMLI LPLVLPPLPP PPFMLLLIPI GIMVLLVVLA FMPSSSKAKD
101: VTCTFM
Best Arabidopsis Sequence Match ( AT3G59900.1 )
(BLAST)
001: MIREISNLQK DIINIQDSYS NNRVMDVGRN NRKNMSFRSS PEKSKQELRR SFSAQKRMMI PANYFSLESL FLLVGLTASL LILPLVLPPL PPPPFMLLLV
101: PIGIMVLLVV LAFMPSSHSN ANTDVTCNFM
Arabidopsis Description
ARGOSARGOS [Source:UniProtKB/TrEMBL;Acc:A0A178VK86]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.