Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
- extracellular 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44030 | Canola | nucleus | 100.0 | 93.44 |
| AT4G37710.2 | Thale cress | nucleus, plastid | 81.58 | 75.61 |
| Bra017849.1-P | Field mustard | nucleus, plastid | 75.44 | 75.44 |
| Bra039937.1-P | Field mustard | nucleus, plastid | 54.39 | 44.93 |
Protein Annotations
Description
AT4G37710 (E=4e-038) | VQ motif-containing protein
Coordinates
chrA08:+:15505071..15505415
Molecular Weight (calculated)
12720.8 Da
IEP (calculated)
9.579
GRAVY (calculated)
-0.744
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQSYLNSQE TATQATKDYL ASLHSSRKQP SKPLKRPISS PLNPMHPHVY RVEPVNFKEL VQRLTGAPEH EPVANPFKSL DDAAKDSSPS FAFDLSSSSW
101: GDLSLRNPAN ISRW
101: GDLSLRNPAN ISRW
001: MEATSQQFMS QSYLNAQETT TRATKNYLTS LHSTRKQPSK PLKRPAISSP LNPMHPHVYR VEPVNFKVLV QRLTGAPEHE TVQAKPLKTS DDAAKQSSSS
101: FAFDPSSSWG DFSFQNPANI SRW
101: FAFDPSSSWG DFSFQNPANI SRW
Arabidopsis Description
VQ29VQ motif-containing protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZG3]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.