Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
- extracellular 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29579 | Canola | plastid | 96.49 | 96.49 |
| Bra010608.1-P | Field mustard | nucleus, plastid | 75.44 | 75.44 |
| AT4G37710.2 | Thale cress | nucleus, plastid | 73.68 | 68.29 |
| Bra039937.1-P | Field mustard | nucleus, plastid | 57.89 | 47.83 |
Protein Annotations
Description
AT4G37710 (E=9e-033) | VQ motif-containing protein
Coordinates
chrA03:+:30915676..30916020
Molecular Weight (calculated)
12845.1 Da
IEP (calculated)
9.578
GRAVY (calculated)
-0.689
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQSYLSAQE TNTLTTRNYL MSLHSTRKQP SKPMKRPVSS PLKSMHPQVY RVEPANFKEL VQRLTGAPEH DDVVKPFKSF DDLANESSSS LAFDLSSSSW
101: GDLSLQTPAN LSRW
101: GDLSLQTPAN LSRW
001: MEATSQQFMS QSYLNAQETT TRATKNYLTS LHSTRKQPSK PLKRPAISSP LNPMHPHVYR VEPVNFKVLV QRLTGAPEHE TVQAKPLKTS DDAAKQSSSS
101: FAFDPSSSWG DFSFQNPANI SRW
101: FAFDPSSSWG DFSFQNPANI SRW
Arabidopsis Description
VQ29VQ motif-containing protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZG3]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.