Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72651 | Canola | nucleus, plastid | 97.37 | 97.37 |
| Bra017849.1-P | Field mustard | nucleus, plastid | 96.49 | 96.49 |
| CDY44030 | Canola | nucleus | 76.32 | 71.31 |
| CDY50261 | Canola | nucleus | 75.44 | 70.49 |
| AT4G37710.2 | Thale cress | nucleus, plastid | 75.44 | 69.92 |
| CDY49439 | Canola | nucleus, plastid | 57.89 | 52.8 |
| CDX76888 | Canola | nucleus, plastid | 52.63 | 25.0 |
Protein Annotations
| EnsemblPlants:CDY29579 | EnsemblPlantsGene:GSBRNA2T00043304001 | InterPro:VQ | PANTHER:PTHR34794 | PANTHER:PTHR34794:SF1 | PFAM:PF05678 |
| ProteinID:CDY29579 | ProteinID:CDY29579.1 | SEG:seg | UniParc:UPI0004EE59DB | UniProt:A0A078GWS5 | MapMan:35.1 |
Description
BnaA03g54240DBnaA03g54240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GWS5]
Coordinates
chrLK032239:+:394780..395124
Molecular Weight (calculated)
12833.0 Da
IEP (calculated)
9.579
GRAVY (calculated)
-0.743
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQSYLSAQE TNTLTTRNYL TSLHSTRKQP SKPMKRPVSS PLKSMHPQVY RVEPVNFKEL VQRLTGAPEH DDVVKPFKSL DDLANESSSS LAFDLSSSSW
101: GDLSHQTPAN LSRW
101: GDLSHQTPAN LSRW
001: MEATSQQFMS QSYLNAQETT TRATKNYLTS LHSTRKQPSK PLKRPAISSP LNPMHPHVYR VEPVNFKVLV QRLTGAPEHE TVQAKPLKTS DDAAKQSSSS
101: FAFDPSSSWG DFSFQNPANI SRW
101: FAFDPSSSWG DFSFQNPANI SRW
Arabidopsis Description
VQ29VQ motif-containing protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZG3]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.