Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44030 | Canola | nucleus | 95.9 | 95.9 |
| AT4G37710.2 | Thale cress | nucleus, plastid | 80.33 | 79.67 |
| CDX72651 | Canola | nucleus, plastid | 70.49 | 75.44 |
| CDY29579 | Canola | plastid | 70.49 | 75.44 |
| CDY49439 | Canola | nucleus, plastid | 54.1 | 52.8 |
| CDX76888 | Canola | nucleus, plastid | 51.64 | 26.25 |
Protein Annotations
| EnsemblPlants:CDY50261 | EnsemblPlantsGene:GSBRNA2T00096257001 | InterPro:VQ | PANTHER:PTHR34794 | PANTHER:PTHR34794:SF1 | PFAM:PF05678 |
| ProteinID:CDY50261 | ProteinID:CDY50261.1 | SEG:seg | UniParc:UPI0004EF2F76 | UniProt:A0A078IJU7 | MapMan:35.1 |
Description
BnaC03g61280DBnaC03g61280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJU7]
Coordinates
chrLK032894:-:93905..94273
Molecular Weight (calculated)
13544.7 Da
IEP (calculated)
7.846
GRAVY (calculated)
-0.771
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MENTSQAFMS QSYPNSQETA TQATKDYLAS LHSTRKQPSK PLKRPISSPL NPMHPHVYRV EPVNFKELVQ RLTGAPEHEP VANPFKSLDD AAKDSSSSFP
101: FDLSSSSWGD LSLRNPANIS GW
101: FDLSSSSWGD LSLRNPANIS GW
001: MEATSQQFMS QSYLNAQETT TRATKNYLTS LHSTRKQPSK PLKRPAISSP LNPMHPHVYR VEPVNFKVLV QRLTGAPEHE TVQAKPLKTS DDAAKQSSSS
101: FAFDPSSSWG DFSFQNPANI SRW
101: FAFDPSSSWG DFSFQNPANI SRW
Arabidopsis Description
VQ29VQ motif-containing protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZG3]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.