Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 2
- peroxisome 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50239 | Canola | plastid | 87.38 | 79.6 |
| CDY65510 | Canola | plastid | 86.75 | 79.48 |
| AT1G21440.1 | Thale cress | plastid | 83.91 | 79.17 |
| Bra015697.1-P | Field mustard | plastid | 72.56 | 67.65 |
| GSMUA_AchrUn_... | Banana | peroxisome | 59.62 | 66.78 |
| Os12t0189300-01 | Rice | plasma membrane | 53.63 | 51.83 |
| Bra000294.1-P | Field mustard | plastid | 26.5 | 17.57 |
Protein Annotations
| Gene3D:3.20.20.60 | MapMan:50.5.4 | EnsemblPlantsGene:Bra017914 | EnsemblPlants:Bra017914.1 | EnsemblPlants:Bra017914.1-P | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Isocitrate_lyase_ph_CS | UniProt:M4DN27 | PFAM:PF13714 | ScanProsite:PS00161 | PANTHER:PTHR42905 | PANTHER:PTHR42905:SF4 |
| InterPro:Pyrv/PenolPyrv_Kinase-like_dom | SUPFAM:SSF51621 | TMHMM:TMhelix | UniParc:UPI000253F0C5 | SEG:seg | : |
Description
AT1G21440 (E=4e-118) | mutase family protein
Coordinates
chrA06:-:8808369..8810031
Molecular Weight (calculated)
35074.2 Da
IEP (calculated)
6.884
GRAVY (calculated)
-0.168
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSRVHRLIE EQGAVLIPGV YDALSAAIVQ QTGFSAALIS GYALSASILG KPDFGLITPK LLLLSVYLFY SVVLTDRRRW QQQLDRFVPL LQAYPSLQMQ
101: ANTGGGNALN VQRTVKDLIA AGAAGCFLED QAWPKRCGHM RGKEVIPAEE HAAKIASARD AIGDFDFFLI ARTDARALSA KTGLSDAIDR ANLYMEAGAD
201: ASFVEAPRDD DELKEIGKRT KGYRLCNMLE GGRTPLHTPD ELKEMGFHLI AHPLTSLYAS TRALVDVLKI LKEKGTTKDH LEKMITFEEF NRLVNLGEWY
301: ELETKYSNLR NALGTNN
101: ANTGGGNALN VQRTVKDLIA AGAAGCFLED QAWPKRCGHM RGKEVIPAEE HAAKIASARD AIGDFDFFLI ARTDARALSA KTGLSDAIDR ANLYMEAGAD
201: ASFVEAPRDD DELKEIGKRT KGYRLCNMLE GGRTPLHTPD ELKEMGFHLI AHPLTSLYAS TRALVDVLKI LKEKGTTKDH LEKMITFEEF NRLVNLGEWY
301: ELETKYSNLR NALGTNN
001: MSMLMAAKST SLFSSNPTIS AKIGQNPRGV RSVYPTVRMQ SRVHRLIEEQ GAVLIPGVYD ALSAAIVQQT GFSAALISGY ALSAVTLGKP DFGLITPPEM
101: AATARSVCAA APKIPIIADA DTGGGNALNV QRTVKDLIAA GAAGCFLEDQ AWPKRCGHMR GKEVIPAEEH AAKIASARDA IGDADFFLIA RTDARALSAK
201: TGLSDAIDRA NLYMEAGADA SFVEAPRDDD ELKEIGRRTK GYRLCNMLEG GRTPLHTPDE LKEMGFHLIA HPLTSLYAST RALVDVLKIL KEKGTTKDHL
301: EKMITFEEFN RLVNLDSWYE LETKYSNLRN ALGETK
101: AATARSVCAA APKIPIIADA DTGGGNALNV QRTVKDLIAA GAAGCFLEDQ AWPKRCGHMR GKEVIPAEEH AAKIASARDA IGDADFFLIA RTDARALSAK
201: TGLSDAIDRA NLYMEAGADA SFVEAPRDDD ELKEIGRRTK GYRLCNMLEG GRTPLHTPDE LKEMGFHLIA HPLTSLYAST RALVDVLKIL KEKGTTKDHL
301: EKMITFEEFN RLVNLDSWYE LETKYSNLRN ALGETK
Arabidopsis Description
At1g21440 [Source:UniProtKB/TrEMBL;Acc:Q501F7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.