Factsheet for Os12t0189300-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 3
plastid 1
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P17380_001	Banana	peroxisome	55.79	59.8
GSMUA_Achr9P08490_001	Banana	peroxisome, plastid	55.49	58.33
GSMUA_Achr6P25770_001	Banana	peroxisome	54.88	57.69
CDX87547	Canola	plastid	58.84	56.76
AT1G77060.1	Thale cress	plastid	58.54	56.64
CDX88338	Canola	plastid	58.54	56.47
Bra015697.1-P	Field mustard	plastid	58.23	56.18
AT1G21440.1	Thale cress	plastid	57.01	55.65
Bra017914.1-P	Field mustard	peroxisome	51.83	53.63
CDY65510	Canola	plastid	56.1	53.18
CDY50239	Canola	plastid	55.79	52.59
GSMUA_Achr1P13130_001	Banana	mitochondrion	54.27	50.14
Os04t0386600-01	Rice	peroxisome	28.66	24.16
Os04t0504600-01	Rice	plastid	32.32	21.07

Protein Annotations

EnsemblPlants:Os12t0189300-01	EnsemblPlantsGene:Os12g0189300	Gene3D:3.20.20.60	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	InterPro:Isocitrate_lyase_ph_CS	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	PANTHER:PTHR42905	PANTHER:PTHR42905:SF4	PFAM:PF13714
ProteinID:BAF29352.1	ProteinID:BAT16193.1	ScanProsite:PS00161	SEG:seg	SUPFAM:SSF51621	UniParc:UPI0000DD9DF7
UniProt:Q0IPL3	MapMan:50.5.4	:	:	:	:

Description

Pyruvate/Phosphoenolpyruvate kinase, catalytic core domain containing protein. (Os12t0189300-01);Non-protein coding transcript. (Os12t0189300-02)

Coordinates

chr12:+:4499739..4503900

Molecular Weight (calculated)

34718.3 Da

IEP (calculated)

6.509

GRAVY (calculated)

-0.107

Length

328 amino acids

Sequence
(BLAST)

001: MAEVNGANNG NGHHGHGNGS GAAAAAIVQK TGFYAGFISG YAVSGSFLGT PDVGLLTPPE MAEVARRICA SAPNTLFIAD ADTGGGNALN VKRTVQDLMA
101: AGAAGCFLED QAWPKKCGHM HGKQVIPAEE HAVKIAAARE VVGDRDFFIV ARTDARSVTG LDDAIRRANL YIDAGADACF VEAPRSDEEL MEICRRTKGY
201: RVCNMLEGGK TPLHTRQELM EMGFHLIKSP LTTVYAAARA LVDVLAALKR AETTRDELHR LTTFTEFNNL VGLDSWLDIE VRFSVNSSSS VPKPLPAPPA
301: LETTTEMEKA KAKAAAVVAG NGATNGVH

Best Arabidopsis Sequence Match ( AT1G77060.1 )
(BLAST)

001: MSMLMAVKTT SLCCSSLNLT ASPTFRRNPR AARLVNPTAR IQTRFHRLIE EQGIVLMPGC YDALSAAIVQ QTGFSAGFIS GYALSASLLG KPDFGLLTPP
101: EMAATARSVC ASAPNIPIIA DADTGGGNAL NIQRTVKDLI AAGAAGCFLE DQAWPKKCGH MRGKQVIPAE EHAAKIASAR DAIGDSDFFL VARTDVRATS
201: AKSGLEDAIA RVNLYMEAGA DASFVEAPRD DDELKEIGKR TKGYRVCNMI EGGVTPLHTP DELKEMGFHL IVHPLTALYA STRALVDVLK TLKENGSTRD
301: HLQKMATFEE FNSLVDLDSW FELEARYSNL RNALGTTKS

Arabidopsis Description

Carboxyvinyl-carboxyphosphonate phosphorylmutase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O49290]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.