Factsheet for Os04t0504600-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
peroxisome 3

Predictors

GFP

MS/MS

Papers

plastid: 17189339
plastid: 27992503

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G358900.2	Wheat	plastid	79.72	82.0
TraesCS2D01G357800.1	Wheat	plastid	79.52	81.8
EES11084	Sorghum	plastid	77.93	79.51
Zm00001d025893_P001	Maize	plastid	75.15	77.14
HORVU2Hr1G087400.1	Barley	peroxisome	73.56	73.41
Os04t0386600-01	Rice	peroxisome	55.47	71.72
KRH01809	Soybean	peroxisome	41.55	70.85
GSMUA_Achr11P...	Banana	plastid	63.22	62.97
VIT_05s0124g00020.t01	Wine grape	plastid	61.63	61.39
KRH46882	Soybean	plastid	56.46	60.94
TraesCS2B01G378300.1	Wheat	peroxisome	79.72	60.85
Solyc05g056270.2.1	Tomato	plastid	56.86	56.63
PGSC0003DMT400060303	Potato	plastid	56.46	56.24
CDY14871	Canola	plastid	50.5	53.36
AT2G43180.1	Thale cress	plastid	50.7	53.24
CDX83497	Canola	plastid	50.3	52.93
Bra000294.1-P	Field mustard	plastid	49.9	52.51
KRH01804	Soybean	mitochondrion	18.49	44.29
GSMUA_Achr10P...	Banana	cytosol	8.15	40.59
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane	13.12	39.52
Os12t0189300-01	Rice	plasma membrane	21.07	32.32

Protein Annotations

EnsemblPlants:Os04t0504600-01	EnsemblPlantsGene:Os04g0504600	EntrezGene:4336329	Gene3D:3.20.20.60	GO:GO:0003674	GO:GO:0003824
InterPro:Pyrv/PenolPyrv_Kinase-like_dom	PANTHER:PTHR42905	PANTHER:PTHR42905:SF2	PFAM:PF13714	ProteinID:BAS89964.1	ProteinID:CAE05556.1
ProteinID:EEE61289.1	RefSeq:XP_015635555.1	SEG:seg	SUPFAM:SSF51621	UniParc:UPI00001B15FE	UniProt:Q7F8Y3
MapMan:50.5.4	:	:	:	:	:

Description

Pyruvate/Phosphoenolpyruvate kinase, catalytic core domain containing protein. (Os04t0504600-01)

Coordinates

chr4:+:25187851..25191496

Molecular Weight (calculated)

53449.0 Da

IEP (calculated)

7.358

GRAVY (calculated)

-0.157

Length

503 amino acids

Sequence
(BLAST)

001: MACHAAALLQ HPPPPPPPAS LPSTACTSSS RRRASPWGGA GRLIRLRLRG HCPSPASARA ARVVSPRCSS YGAAADAGES PAEALRRVLE SPGAHQAPAC
101: YDALSARLVG RAGFKVCFTS GFSISAARLG LPDVGLISYG EMIDQGCLIT EAASIPVIGD ADNGYGNCMN VKRTVKGFIK AGFAGIILED QVSPKACGHT
201: QGRKVVSREE AIMHIKAAVD ARKESGSDIV IVARTDSRQA LSLDEALWRV RAFADAGADV LFIDALASRE EMKAFCAVSP GVPKMANMLE GGGKTPILSP
301: AELEETGYKL IAYPLSLIGV SMRAMEDALI AIKGGRIPPP SSLPSFEEIK DTLGFNSYYE EEKRYVVTPA QSSSYRSGYY DNTSEASSPG DAKSRTETPQ
401: EPVIDILPQL YDLGSTGGRG PSAGMWSRTL RLRITGRDGV QKIDARIPAG FLEGMTKVIP GLAGANIMER LRNAPIDSEN PQNGQILLDF EDAMGDRIQV
501: FIE

Best Arabidopsis Sequence Match ( AT2G43180.1 )
(BLAST)

001: MAALSFCSSS PPRILHKQSK SSFFPSSASS SFTQTVGELF ANPFSVSRRF RGAVNSTVVS DESGNAKLPS SPAKKLRNIM QSPGVLQGPC CFDALSAKLI
101: ERAGFPYCIT SGFSISASRL GLPDKGLISY GEMVDQGQQI TQSVSIPVIG DGGNGYGNAM NVKRTVKGYI KAGFAGIIIN DEVCCENTKS ERRVVSREEA
201: VMRVKAAVDA RRECDSDIVI VAQTDSREAI SLEESLIRAR AFTDAGADVL SVDSLVSREE MKAFCNVYPL VPKLANMLES GGKIPILNPL ELEEIGYKLV
301: AYPISLIGVS IQAMQDALLA IKGGRIPPPG SMASLEEIGE ILGFDTYEEE EKRYATSSSD REVSSSSVYR NQRVAKDDPE QREDLIVEVI TPEVYNEPRN
401: PFSRIWSRSL RIKIIGRDGF EKLDVRIPAG FLEGVTNIVP ALGGVNLKQL MDDAADEVGG KILLDFKDTA GDRIQVFLE

Arabidopsis Description

Phosphoenolpyruvate carboxylase family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYI4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.