Factsheet for PGSC0003DMT400060303

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
mitochondrion 2
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g056270.2.1	Tomato	plastid	97.03	97.03
Zm00001d003974_P001	Maize	peroxisome	18.81	74.22
KRH01809	Soybean	peroxisome	42.77	73.22
OQU81389	Sorghum	peroxisome	42.38	68.81
TraesCS2A01G282900.1	Wheat	golgi, unclear	43.56	68.54
KRH46882	Soybean	plastid	62.18	67.38
Os04t0386600-01	Rice	peroxisome	50.1	65.04
VIT_05s0124g00020.t01	Wine grape	plastid	63.96	63.96
CDY14871	Canola	plastid	57.82	61.34
TraesCS2D01G281600.1	Wheat	peroxisome	44.95	61.19
TraesCS2B01G300200.2	Wheat	mitochondrion, peroxisome	43.96	60.99
CDX83497	Canola	plastid	57.62	60.88
Bra000294.1-P	Field mustard	plastid	57.43	60.67
HORVU2Hr1G069600.1	Barley	peroxisome	10.89	59.78
AT2G43180.1	Thale cress	plastid	55.84	58.87
TraesCS2A01G358900.2	Wheat	plastid	56.63	58.49
HORVU2Hr1G069590.4	Barley	peroxisome, plastid	32.67	58.1
Zm00001d025893_P001	Maize	plastid	56.24	57.96
TraesCS2D01G357800.1	Wheat	plastid	55.84	57.67
EES11084	Sorghum	plastid	55.45	56.8
KRH01804	Soybean	mitochondrion	23.56	56.67
Os04t0504600-01	Rice	plastid	56.24	56.46
GSMUA_Achr11P...	Banana	plastid	56.44	56.44
HORVU2Hr1G087400.1	Barley	peroxisome	53.86	53.97
TraesCS2B01G378300.1	Wheat	peroxisome	56.44	43.25
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane	13.86	41.92
GSMUA_Achr10P...	Banana	cytosol	7.72	38.61

Protein Annotations

EnsemblPlants:PGSC0003DMT400060303	EnsemblPlantsGene:PGSC0003DMG400023455	EntrezGene:102580274	Gene3D:3.20.20.60	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536
InterPro:Pyrv/PenolPyrv_Kinase-like_dom	PANTHER:PTHR42905	PANTHER:PTHR42905:SF2	PFAM:PF13714	PGSC:PGSC0003DMG400023455	RefSeq:XP_006345779.1
SUPFAM:SSF51621	UniParc:UPI00029667C3	UniProt:M1C5K3	MapMan:50.5.4	:	:

Description

Isocitrate lyase and phosphorylmutase [Source:PGSC_GENE;Acc:PGSC0003DMG400023455]

Coordinates

chr5:+:51750943..51758443

Molecular Weight (calculated)

54569.1 Da

IEP (calculated)

7.908

GRAVY (calculated)

-0.244

Length

505 amino acids

Sequence
(BLAST)

001: MNSASISSTD FRTFSNLPSR RTAYLAHRRV AETLPQSGSS LPERVGSSSS KAGRKTSIRY TVSASYGDKE SGSVNSNEYT SPAKALRKLL KSPGVHQGPA
101: CFDALSAKLV ERAGFDFCFT TGFGISAARL GLPDAGLISY GEMVAQGREI TQAVSIPVIG DGDNGYGNAM NVKRTVKGYI RAGFGGIILE DQVSPKACGH
201: TRGRKVVSRE EAIMRIKAAV DARKESGSDI VIVARTDARQ AVSFEEALWR ARALADAGAD VLFIDALASK EEMKAFCDVY PLVPKLANML EGGGKTPIFT
301: PIELEELGYK LVVYPLSLIG VSIGAMQDAL SAIKGGRIPS PGSMPSFEEL KEILGFNTYY EEEKRYATTS SQLPSRKGDF SSNSNEYGVQ PGIQADREQR
401: SQIPENPVEV LIPEVYDKFS GEGKKGNFSM AWSRKLRVKI TGKDGFEKLD IRIPAGFLEG ITNIVPALVG VNIKSLLDEA TLEEGGKQLL DFQDTMGDRI
501: QVILE

Best Arabidopsis Sequence Match ( AT2G43180.3 )
(BLAST)

001: MAALSFCSSS PPRILHKQSK SSFFPSSASS SFTQTVGELF ANPFSVSRRF RGAVNSTVVS DESGNAKLPS SPAKKLRNIM QSPGVLQGPC CFDALSAKLI
101: ERAGFPYCIT SGFSISASRL GLPDKGLISY GEMVDQGQQI TQSVSIPVIG DGGNGYGNAM NVKRTVKGYI KAGFAGIIIN DEVCCENTKS ERRVVSREEA
201: VMRVKAAVDA RRECDSDIVI VAQTDSREAI SLEESLIRAR AFTDAGADVL SVDSLVSREE MKAFCNVYPL VPKLANMLES GGKIPILNPL ELEEIGYKLV
301: AYPISLIGVS IQAMQDALLA IKGGRIPPPG SMASLEEIGE ILGFDTYEEE EKRYATSSSD RVSSSSVYRN QRVAKDDPEQ REDLIVEVIT PEVYNEPRNP
401: FSRIWSRSLR IKIIGRDGFE KLDVRIPAGF LEGVTNIVPA LGGVNLKQLM DDAADEVGGK ILLDFKDTAG DRIQVFLE

Arabidopsis Description

Phosphoenolpyruvate carboxylase family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYI4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.