CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000294.1-P	Field mustard	plastid	98.95	98.95
CDY14871	Canola	plastid	94.35	94.75
AT2G43180.1	Thale cress	plastid	74.48	74.32
KRH01809	Soybean	peroxisome	38.7	62.71
Zm00001d003974_P001	Maize	peroxisome	16.74	62.5
KRH46882	Soybean	plastid	59.0	60.52
VIT_05s0124g00020.t01	Wine grape	plastid	61.92	58.61
TraesCS2A01G282900.1	Wheat	golgi, unclear	38.7	57.63
Solyc05g056270.2.1	Tomato	plastid	60.88	57.62
PGSC0003DMT400060303	Potato	plastid	60.88	57.62
OQU81389	Sorghum	peroxisome	37.45	57.56
KRH01804	Soybean	mitochondrion	24.06	54.76
Os04t0386600-01	Rice	peroxisome	44.56	54.76
GSMUA_Achr11P...	Banana	plastid	57.74	54.65
HORVU2Hr1G069600.1	Barley	peroxisome	10.46	54.35
TraesCS2A01G358900.2	Wheat	plastid	54.39	53.17
TraesCS2D01G357800.1	Wheat	plastid	53.97	52.76
Zm00001d025893_P001	Maize	plastid	52.51	51.22
EES11084	Sorghum	plastid	52.3	50.71
TraesCS2B01G300200.2	Wheat	mitochondrion, peroxisome	38.49	50.55
Os04t0504600-01	Rice	plastid	52.93	50.3
TraesCS2D01G281600.1	Wheat	peroxisome	38.91	50.13
HORVU2Hr1G069590.4	Barley	peroxisome, plastid	29.08	48.94
HORVU2Hr1G087400.1	Barley	peroxisome	50.0	47.42
TraesCS2B01G378300.1	Wheat	peroxisome	54.18	39.3
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane	13.18	37.72
GSMUA_Achr10P...	Banana	cytosol	7.74	36.63
CDX87547	Canola	plastid	19.04	26.76
CDX88338	Canola	plastid	18.83	26.47
CDY65510	Canola	plastid	18.83	26.01
CDY50239	Canola	plastid	18.83	25.86

Protein Annotations

EnsemblPlants:CDX83497	EnsemblPlantsGene:GSBRNA2T00139085001	Gene3D:3.20.20.60	GO:A0A078D2Z7	GO:GO:0003674	GO:GO:0003824
InterPro:Pyrv/PenolPyrv_Kinase-like_dom	PANTHER:PTHR42905	PANTHER:PTHR42905:SF2	PFAM:PF13714	ProteinID:CDX83497	ProteinID:CDX83497.1
SEG:seg	SUPFAM:SSF51621	UniParc:UPI0004EF4915	MapMan:50.5.4	:	:

Description

BnaA03g20090D

Coordinates

chrLK031832:+:1791330..1793589

Molecular Weight (calculated)

51560.9 Da

IEP (calculated)

6.205

GRAVY (calculated)

-0.124

Length

478 amino acids

Sequence
(BLAST)

001: MASLSSYTSF PPRVLLLHRQ QSKPILFPPD STPSIRQLYT KPISFSRRSR VAINATAAAS DSSGNSNPSS PAKKLREIMQ SPGVLQGPCC FDALSAKLVE
101: RAGFPYCLTT GLSISAARVG LPDKGLISYG EMVDQGQQIT QAVSIPVIGD GGNGFGNAIN VKRTVKGYIR AGFAGIIIND QVSSGGERGV VSREEAVMRV
201: KAAVDARREC GSDIVIVAQT DSREVMSLEE SFSRARAFTD AGADVLSVDS LVSREEMKSF CNVYPLVPKL ANMLETGGKI PMLNPLEIEE IGYKLVAYPL
301: SLIGVSIRAM QDALLAIKGG RIPPPGSMPS LEEIEGILGY DTYREEEKRY AISSSSNRGS SSSSVYGNQR VAQDESKQRV EDPVVEVMVA EVVSNESRNP
401: FSRIWSRSLR IKIIGRDGFE KLDVRIPAGF LEGVTNIVPA LGGVNLKQLM DDAADEVGGK LLLDFKDTAG DRIQVFLE

Best Arabidopsis Sequence Match ( AT2G43180.1 )
(BLAST)

001: MAALSFCSSS PPRILHKQSK SSFFPSSASS SFTQTVGELF ANPFSVSRRF RGAVNSTVVS DESGNAKLPS SPAKKLRNIM QSPGVLQGPC CFDALSAKLI
101: ERAGFPYCIT SGFSISASRL GLPDKGLISY GEMVDQGQQI TQSVSIPVIG DGGNGYGNAM NVKRTVKGYI KAGFAGIIIN DEVCCENTKS ERRVVSREEA
201: VMRVKAAVDA RRECDSDIVI VAQTDSREAI SLEESLIRAR AFTDAGADVL SVDSLVSREE MKAFCNVYPL VPKLANMLES GGKIPILNPL ELEEIGYKLV
301: AYPISLIGVS IQAMQDALLA IKGGRIPPPG SMASLEEIGE ILGFDTYEEE EKRYATSSSD REVSSSSVYR NQRVAKDDPE QREDLIVEVI TPEVYNEPRN
401: PFSRIWSRSL RIKIIGRDGF EKLDVRIPAG FLEGVTNIVP ALGGVNLKQL MDDAADEVGG KILLDFKDTA GDRIQVFLE

Arabidopsis Description

Phosphoenolpyruvate carboxylase family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYI4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.