Factsheet for Zm00001d025893_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 20089766
extracellular: 20408568
plastid: 22065420
plastid: 23198870

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11084	Sorghum	plastid	86.73	86.21
Zm00001d003974_P001	Maize	peroxisome	20.61	78.91
TraesCS2A01G358900.2	Wheat	plastid	78.57	78.73
TraesCS2D01G357800.1	Wheat	plastid	78.16	78.32
Os04t0504600-01	Rice	plastid	77.14	75.15
HORVU2Hr1G087400.1	Barley	peroxisome	72.24	70.24
KRH01809	Soybean	peroxisome	41.63	69.15
GSMUA_Achr11P...	Banana	plastid	63.06	61.19
KRH46882	Soybean	plastid	57.96	60.94
VIT_05s0124g00020.t01	Wine grape	plastid	62.24	60.4
TraesCS2B01G378300.1	Wheat	peroxisome	78.37	58.27
PGSC0003DMT400060303	Potato	plastid	57.96	56.24
Solyc05g056270.2.1	Tomato	plastid	57.76	56.04
CDY14871	Canola	plastid	52.04	53.57
CDX83497	Canola	plastid	51.22	52.51
Bra000294.1-P	Field mustard	plastid	50.82	52.09
AT2G43180.1	Thale cress	plastid	50.0	51.15
KRH01804	Soybean	mitochondrion	19.39	45.24
GSMUA_Achr10P...	Banana	cytosol	7.96	38.61
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane	12.86	37.72

Protein Annotations

EntrezGene:100194050	Gene3D:3.20.20.60	MapMan:50.5.4	ProteinID:AQK44959.1	EMBL:BT063364	UniProt:C0P4Z5
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0009507	GO:GO:0009536	PFAM:PF13714	PANTHER:PTHR42905	PANTHER:PTHR42905:SF2	InterPro:Pyrv/PenolPyrv_Kinase-like_dom
SUPFAM:SSF51621	UniParc:UPI0001948D2D	EnsemblPlantsGene:Zm00001d025893	EnsemblPlants:Zm00001d025893_P001	EnsemblPlants:Zm00001d025893_T001	SEG:seg

Description

Phosphoenolpyruvate carboxylase family protein

Coordinates

chr10:-:133218764..133222162

Molecular Weight (calculated)

52434.0 Da

IEP (calculated)

7.380

GRAVY (calculated)

-0.109

Length

490 amino acids

Sequence
(BLAST)

001: MACCSAVLHH PLGFSLTPCS ASRAPPRIQR VGVATPSAAS ARPLSRARIS PRCTYSGGAS AAPGPGELPA AALRRVLEMP GAHQAPACYD ALSARLVERA
101: EFRACFTSGF SISAARLGLP DVGLISYGEM IDQGRLMTEA VSIPVIGDAD NGYGNCMNVK RTVKGFINAG FAGIILEDQV SPKACGHTQG RKVVSREEAI
201: MHIKAAVDAR NESGSDIVIV ARTDSRQAVS LNEALWRVRA FADAGADVLF IDALASREEM KAFCAIAPGV PKMANMLEGG GKTPILSPVE LEEIGYKIIA
301: YPLSLIGVSM RAMEDALIAI RGGRIPPPSS LPTFEEIKNT LGFNHYYEED KRYAVTPAQP LYGTGYDNYT SEPNSPGDSR SRAKKTQEPV IDILPQLYDI
401: GSSDSRGPST GMWSRTLRLK ITGRDGIQKI DARIPAGFLE GMTRIIPGLA GANIMERLRN APVDTDNPQN GQILLDFEDA MGDRIQVFIA

Best Arabidopsis Sequence Match ( AT2G43180.3 )
(BLAST)

001: MAALSFCSSS PPRILHKQSK SSFFPSSASS SFTQTVGELF ANPFSVSRRF RGAVNSTVVS DESGNAKLPS SPAKKLRNIM QSPGVLQGPC CFDALSAKLI
101: ERAGFPYCIT SGFSISASRL GLPDKGLISY GEMVDQGQQI TQSVSIPVIG DGGNGYGNAM NVKRTVKGYI KAGFAGIIIN DEVCCENTKS ERRVVSREEA
201: VMRVKAAVDA RRECDSDIVI VAQTDSREAI SLEESLIRAR AFTDAGADVL SVDSLVSREE MKAFCNVYPL VPKLANMLES GGKIPILNPL ELEEIGYKLV
301: AYPISLIGVS IQAMQDALLA IKGGRIPPPG SMASLEEIGE ILGFDTYEEE EKRYATSSSD RVSSSSVYRN QRVAKDDPEQ REDLIVEVIT PEVYNEPRNP
401: FSRIWSRSLR IKIIGRDGFE KLDVRIPAGF LEGVTNIVPA LGGVNLKQLM DDAADEVGGK ILLDFKDTAG DRIQVFLE

Arabidopsis Description

Phosphoenolpyruvate carboxylase family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYI4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.