CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83497	Canola	plastid	94.75	94.35
AT2G43180.1	Thale cress	plastid	75.42	74.95
KRH01809	Soybean	peroxisome	39.5	63.73
Zm00001d003974_P001	Maize	peroxisome	16.81	62.5
KRH46882	Soybean	plastid	59.87	61.16
VIT_05s0124g00020.t01	Wine grape	plastid	62.6	59.01
TraesCS2A01G282900.1	Wheat	golgi, unclear	39.29	58.26
OQU81389	Sorghum	peroxisome	38.03	58.2
PGSC0003DMT400060303	Potato	plastid	61.34	57.82
Solyc05g056270.2.1	Tomato	plastid	61.13	57.62
KRH01804	Soybean	mitochondrion	24.58	55.71
Os04t0386600-01	Rice	peroxisome	45.38	55.53
GSMUA_Achr11P...	Banana	plastid	57.77	54.46
HORVU2Hr1G069600.1	Barley	peroxisome	10.5	54.35
TraesCS2A01G358900.2	Wheat	plastid	54.62	53.17
TraesCS2D01G357800.1	Wheat	plastid	54.41	52.97
Zm00001d025893_P001	Maize	plastid	53.57	52.04
TraesCS2B01G300200.2	Wheat	mitochondrion, peroxisome	39.29	51.37
EES11084	Sorghum	plastid	52.73	50.91
TraesCS2D01G281600.1	Wheat	peroxisome	39.5	50.67
Os04t0504600-01	Rice	plastid	53.36	50.5
HORVU2Hr1G069590.4	Barley	peroxisome, plastid	30.04	50.35
HORVU2Hr1G087400.1	Barley	peroxisome	50.42	47.62
TraesCS2B01G378300.1	Wheat	peroxisome	54.41	39.3
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane	13.45	38.32
GSMUA_Achr10P...	Banana	cytosol	7.77	36.63
CDX87547	Canola	plastid	19.12	26.76
CDX88338	Canola	plastid	18.91	26.47
CDY65510	Canola	plastid	18.91	26.01
CDY50239	Canola	plastid	18.91	25.86

Protein Annotations

EnsemblPlants:CDY14871	EnsemblPlantsGene:GSBRNA2T00084763001	Gene3D:3.20.20.60	GO:A0A078FNZ1	GO:GO:0003674	GO:GO:0003824
InterPro:Pyrv/PenolPyrv_Kinase-like_dom	PANTHER:PTHR42905	PANTHER:PTHR42905:SF2	PFAM:PF13714	ProteinID:CDY14871	ProteinID:CDY14871.1
SEG:seg	SUPFAM:SSF51621	UniParc:UPI0004EBA1CE	UniProt:A0A078FNZ1	MapMan:50.5.4	:

Description

BnaC04g48680DBnaC04g48680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FNZ1]

Coordinates

chrLK032047:-:812718..815101

Molecular Weight (calculated)

51312.5 Da

IEP (calculated)

6.206

GRAVY (calculated)

-0.170

Length

476 amino acids

Sequence
(BLAST)

001: MATLSSYTSS PPRILHRQQS KPILFPPDST PSIRQLYTKP ISVSRRSRGA INATAAASDT SGNSNASSPA KKLREIMQSP GVLQGPCCFD ALSAKLVERA
101: GFPYCLTTGF SISAARVGLP DKGLISYGEM VDQGQQITQA VSIPVIGDGG NGFGNAMNVK RTVKGYIKAG FAGIIINDQV SSGGGRGVVS REEAVMRVKA
201: AVDTRRECGS DIVIVAQTDS REVISLEESF SRARAFTDAG ADVLSVDSLV SREEMKSFCN VYPLVPKLAN MLETGGKIPM LNPLEIEEIG YKLVAYPLSL
301: IGVSIRAMQD ALLAIKGGRI PPPGSMPSLE EIEEILGYDT YREEEKRYAT SSSSDRGSSR RSVYGGNQRV VQDDSEQRVD PVVEVMIPEV VSNESRNPFS
401: RIWSRSLRIK IIGRDGIEKL DVRIPAGFLE GVTNIVPALG GVNLKQLMDD AADEVGGKLL LDFKDTAGDR IQVFLE

Best Arabidopsis Sequence Match ( AT2G43180.1 )
(BLAST)

001: MAALSFCSSS PPRILHKQSK SSFFPSSASS SFTQTVGELF ANPFSVSRRF RGAVNSTVVS DESGNAKLPS SPAKKLRNIM QSPGVLQGPC CFDALSAKLI
101: ERAGFPYCIT SGFSISASRL GLPDKGLISY GEMVDQGQQI TQSVSIPVIG DGGNGYGNAM NVKRTVKGYI KAGFAGIIIN DEVCCENTKS ERRVVSREEA
201: VMRVKAAVDA RRECDSDIVI VAQTDSREAI SLEESLIRAR AFTDAGADVL SVDSLVSREE MKAFCNVYPL VPKLANMLES GGKIPILNPL ELEEIGYKLV
301: AYPISLIGVS IQAMQDALLA IKGGRIPPPG SMASLEEIGE ILGFDTYEEE EKRYATSSSD REVSSSSVYR NQRVAKDDPE QREDLIVEVI TPEVYNEPRN
401: PFSRIWSRSL RIKIIGRDGF EKLDVRIPAG FLEGVTNIVP ALGGVNLKQL MDDAADEVGG KILLDFKDTA GDRIQVFLE

Arabidopsis Description

Phosphoenolpyruvate carboxylase family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYI4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.