Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY65510 | Canola | plastid | 95.69 | 96.24 |
| AT1G21440.1 | Thale cress | plastid | 89.66 | 92.86 |
| Bra017914.1-P | Field mustard | peroxisome | 79.6 | 87.38 |
| CDX88338 | Canola | plastid | 77.01 | 78.82 |
| CDX87547 | Canola | plastid | 76.72 | 78.53 |
| GSMUA_AchrUn_... | Banana | peroxisome | 58.91 | 72.44 |
| Os12t0189300-01 | Rice | plasma membrane | 52.59 | 55.79 |
| CDY14871 | Canola | plastid | 25.86 | 18.91 |
| CDX83497 | Canola | plastid | 25.86 | 18.83 |
Protein Annotations
| EnsemblPlants:CDY50239 | EnsemblPlantsGene:GSBRNA2T00096217001 | Gene3D:3.20.20.60 | GO:A0A078ILM1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | InterPro:Isocitrate_lyase_ph_CS | InterPro:Pyrv/PenolPyrv_Kinase-like_dom | PANTHER:PTHR42905 | PANTHER:PTHR42905:SF4 |
| PFAM:PF13714 | ProteinID:CDY50239 | ProteinID:CDY50239.1 | ScanProsite:PS00161 | SEG:seg | SUPFAM:SSF51621 |
| UniParc:UPI0004EDFBC5 | UniProt:A0A078ILM1 | MapMan:50.5.4 | : | : | : |
Description
BnaA06g15160DBnaA06g15160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ILM1]
Coordinates
chrLK032892:-:38834..40812
Molecular Weight (calculated)
37814.4 Da
IEP (calculated)
8.115
GRAVY (calculated)
-0.182
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMLMAAKST SLCYSNPSIS SRTKQNPRAV RYAYPTVRMQ SRVHRLIEEQ GAVLIPGVYD ALSAAIVQQT GFSAALISGY ALSASILGKP DFGLITPPEM
101: AAAARSVCSA APGIPILADA GNSYLKCLYM RSYTGGGNAL NVQRTVKDLI AAGAAGCFLE DQAWPKRCGH MRGKEVIPAE EHAAKIASAR DAIGDSDFFL
201: IARTDARALS AKTGLSDAID RANLYMEAGA DASFVEAPRD DDELKEIGKR TKGYRLCNML EGGRTPLHTP DELKEMGFHL IAHPLTSLYA STRALVDVLK
301: ILKEKGTTKD HLEKMITFEE FNRLVNLGEW YELETKYSNL RNALGTNN
101: AAAARSVCSA APGIPILADA GNSYLKCLYM RSYTGGGNAL NVQRTVKDLI AAGAAGCFLE DQAWPKRCGH MRGKEVIPAE EHAAKIASAR DAIGDSDFFL
201: IARTDARALS AKTGLSDAID RANLYMEAGA DASFVEAPRD DDELKEIGKR TKGYRLCNML EGGRTPLHTP DELKEMGFHL IAHPLTSLYA STRALVDVLK
301: ILKEKGTTKD HLEKMITFEE FNRLVNLGEW YELETKYSNL RNALGTNN
001: MSMLMAAKST SLFSSNPTIS AKIGQNPRGV RSVYPTVRMQ SRVHRLIEEQ GAVLIPGVYD ALSAAIVQQT GFSAALISGY ALSAVTLGKP DFGLITPPEM
101: AATARSVCAA APKIPIIADA DTGGGNALNV QRTVKDLIAA GAAGCFLEDQ AWPKRCGHMR GKEVIPAEEH AAKIASARDA IGDADFFLIA RTDARALSAK
201: TGLSDAIDRA NLYMEAGADA SFVEAPRDDD ELKEIGRRTK GYRLCNMLEG GRTPLHTPDE LKEMGFHLIA HPLTSLYAST RALVDVLKIL KEKGTTKDHL
301: EKMITFEEFN RLVNLDSWYE LETKYSNLRN ALGETK
101: AATARSVCAA APKIPIIADA DTGGGNALNV QRTVKDLIAA GAAGCFLEDQ AWPKRCGHMR GKEVIPAEEH AAKIASARDA IGDADFFLIA RTDARALSAK
201: TGLSDAIDRA NLYMEAGADA SFVEAPRDDD ELKEIGRRTK GYRLCNMLEG GRTPLHTPDE LKEMGFHLIA HPLTSLYAST RALVDVLKIL KEKGTTKDHL
301: EKMITFEEFN RLVNLDSWYE LETKYSNLRN ALGETK
Arabidopsis Description
At1g21440 [Source:UniProtKB/TrEMBL;Acc:Q501F7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.