Subcellular Localization
min:
: max
Winner_takes_all: extracellular, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 2
- golgi 2
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35973 | Canola | extracellular | 98.63 | 98.63 |
| CDY28008 | Canola | extracellular | 95.89 | 95.89 |
| PGSC0003DMT400080257 | Potato | cytosol, extracellular, golgi | 90.41 | 89.19 |
| Solyc12g099710.1.1 | Tomato | extracellular | 89.04 | 87.84 |
| Bra040039.1-P | Field mustard | extracellular | 87.67 | 87.67 |
| Bra001276.1-P | Field mustard | cytosol, plasma membrane | 83.56 | 85.92 |
| KRG99058 | Soybean | cytosol, extracellular, mitochondrion | 57.53 | 85.71 |
| GSMUA_Achr11P... | Banana | cytosol | 86.3 | 85.14 |
| KRH45939 | Soybean | cytosol, extracellular, plastid | 84.93 | 83.78 |
| VIT_06s0009g03590.t01 | Wine grape | cytosol, extracellular, golgi | 84.93 | 83.78 |
| AT3G07910.1 | Thale cress | extracellular | 82.19 | 81.08 |
| TraesCS1A01G167200.1 | Wheat | cytosol, extracellular, mitochondrion, plasma membrane | 82.19 | 80.0 |
| TraesCS1B01G183600.1 | Wheat | cytosol, extracellular, plasma membrane | 82.19 | 80.0 |
| TraesCS1D01G173700.1 | Wheat | cytosol, extracellular, mitochondrion, plasma membrane | 82.19 | 80.0 |
| EES11552 | Sorghum | extracellular, golgi, plastid | 80.82 | 78.67 |
| KRH62867 | Soybean | extracellular | 68.49 | 70.42 |
| EER91445 | Sorghum | extracellular | 61.64 | 58.44 |
| Zm00001d026463_P002 | Maize | mitochondrion | 53.42 | 42.39 |
Protein Annotations
| EnsemblPlants:Bra029687.1 | EnsemblPlants:Bra029687.1-P | EnsemblPlantsGene:Bra029687 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Romo1/Mgr2 | PANTHER:PTHR28525 | PANTHER:PTHR28525:SF3 | PFAM:PF10247 | SEG:seg | SMART:SM01378 |
| TMHMM:TMhelix | UniParc:UPI0002547DF1 | UniProt:M4ELL9 | MapMan:35.2 | : | : |
Description
AT3G07910 (E=2e-013) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reactive oxygen species modulator 1 (InterPro:IPR018450); Has 146 Blast hits to 146 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 6; Plants - 24; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Coordinates
chrA05:+:22651884..22652759
Molecular Weight (calculated)
7420.2 Da
IEP (calculated)
10.187
GRAVY (calculated)
0.659
Length
73 amino acids
Sequence
(BLAST)
(BLAST)
1: MARETSCLTR ITAGVAIGGA LGGAVGAVYG TYEAVRFRVP GLMKIRYIGQ TTLGSAAIFG LFLGAGSLIH CGK
1: MAKNSCLAKI TAGVAVGGAL GGAVGAVYGT YEAIRVKVPG LHKVRFIGQT TLSSAAIFGL FLGAGSLIHC GKGY
Arabidopsis Description
AT3g07910/F17A17_25 [Source:UniProtKB/TrEMBL;Acc:Q9SFC3]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.