Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH45939 | Soybean | cytosol, extracellular, plastid | 100.0 | 66.22 |
| VIT_06s0009g03590.t01 | Wine grape | cytosol, extracellular, golgi | 95.92 | 63.51 |
| GSMUA_Achr11P... | Banana | cytosol | 95.92 | 63.51 |
| Solyc12g099710.1.1 | Tomato | extracellular | 93.88 | 62.16 |
| PGSC0003DMT400080257 | Potato | cytosol, extracellular, golgi | 93.88 | 62.16 |
| Bra001276.1-P | Field mustard | cytosol, plasma membrane | 87.76 | 60.56 |
| CDX74023 | Canola | cytosol, plasma membrane | 87.76 | 60.56 |
| CDY07966 | Canola | cytosol, plasma membrane | 87.76 | 60.56 |
| CDY35973 | Canola | extracellular | 87.76 | 58.9 |
| AT3G07910.1 | Thale cress | extracellular | 87.76 | 58.11 |
| Bra029687.1-P | Field mustard | cytosol, extracellular, nucleus | 85.71 | 57.53 |
| CDY28008 | Canola | extracellular | 85.71 | 57.53 |
| EES11552 | Sorghum | extracellular, golgi, plastid | 87.76 | 57.33 |
| TraesCS1A01G167200.1 | Wheat | cytosol, extracellular, mitochondrion, plasma membrane | 85.71 | 56.0 |
| TraesCS1B01G183600.1 | Wheat | cytosol, extracellular, plasma membrane | 85.71 | 56.0 |
| TraesCS1D01G173700.1 | Wheat | cytosol, extracellular, mitochondrion, plasma membrane | 85.71 | 56.0 |
| KRH62867 | Soybean | extracellular | 79.59 | 54.93 |
| CDY22143 | Canola | extracellular | 81.63 | 54.79 |
| Bra040039.1-P | Field mustard | extracellular | 81.63 | 54.79 |
| Zm00001d026463_P002 | Maize | mitochondrion | 75.51 | 40.22 |
| EER91445 | Sorghum | extracellular | 61.22 | 38.96 |
Protein Annotations
| EMBL:ACUP02010957 | EnsemblPlants:KRG99058 | EnsemblPlantsGene:GLYMA_18G1177002 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Romo1/Mgr2 | PANTHER:PTHR28525 | PANTHER:PTHR28525:SF3 | PFAM:PF10247 | ProteinID:KRG99058 | ProteinID:KRG99058.1 |
| SMART:SM01378 | TMHMM:TMhelix | UniParc:UPI0006ED72DB | UniProt:A0A0R0F7G2 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr18:-:14496764..14498447
Molecular Weight (calculated)
5213.5 Da
IEP (calculated)
9.963
GRAVY (calculated)
0.453
Length
49 amino acids
Sequence
(BLAST)
(BLAST)
1: AVYGTYEAIR YKVPGLLKIR HIGQTTLGSA AIFGLFLGAG SLIHCGKSY
1: MAKNSCLAKI TAGVAVGGAL GGAVGAVYGT YEAIRVKVPG LHKVRFIGQT TLSSAAIFGL FLGAGSLIHC GKGY
Arabidopsis Description
AT3g07910/F17A17_25 [Source:UniProtKB/TrEMBL;Acc:Q9SFC3]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.