Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra025379.1-P | |
| Bra033088.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G10470.1 | Bra025379.1-P | AT3G29160.1 | 21798944 |
| AT4G10470.1 | Bra033088.1-P | AT3G29160.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44971 | Canola | nucleus | 97.29 | 97.48 |
| AT1G33050.4 | Thale cress | nucleus | 69.96 | 52.09 |
| AT4G10470.1 | Thale cress | plastid | 29.84 | 39.69 |
Protein Annotations
Description
AT1G33050 (E=7e-076) | unknown protein
Coordinates
chrA08:+:7681147..7682957
Molecular Weight (calculated)
56191.1 Da
IEP (calculated)
5.131
GRAVY (calculated)
-0.512
Length
516 amino acids
Sequence
(BLAST)
(BLAST)
001: MKQCSLGIDG LRSSLSASKS EHEDSIFRDY TLDLSFLSSD DSLSRDVDTT TTKALLNPNP LVSKLPEMLI VSSTVAGDGE LELSCANATE HSSTDFEEDT
101: PCWIGINSRE TLASAGAICR RSTDDDLSGF RRLNPLAPQF IPSNTIKVLE KDGLKKSLSS DFPSSSGEFN LDDAASILAD ESLGFVSQDG NEFQQSKRLD
201: PLAPVFVPSN AKLSPSAFET NAHSTTYSDN KSLGKVKIDT PSREAARIHI SGSYNKSRGQ RRLNPLAPQF SLSDTKPKAY SYASSSFKSP TADSNFGSTK
301: WYAVEPNTTL SVNGNQDFPF HVVETAAGSS SRNAKASSGG SSPKMDVMKL LTTIHGLSEL LTLAHGSESS DSPEELHLIN STVQNLNMYI QNGIQERSVV
401: QHNSYDLQLL SNKSKLSIRD LQLPSTNNMT VDLGVRRKEK YSVVSGETFP DSGLYQYGVT KDEGFGQVVA KSGYQQNHQG EEQINPQSLF YKSLWLKAEA
501: ERCLMVYETS LSNPGS
101: PCWIGINSRE TLASAGAICR RSTDDDLSGF RRLNPLAPQF IPSNTIKVLE KDGLKKSLSS DFPSSSGEFN LDDAASILAD ESLGFVSQDG NEFQQSKRLD
201: PLAPVFVPSN AKLSPSAFET NAHSTTYSDN KSLGKVKIDT PSREAARIHI SGSYNKSRGQ RRLNPLAPQF SLSDTKPKAY SYASSSFKSP TADSNFGSTK
301: WYAVEPNTTL SVNGNQDFPF HVVETAAGSS SRNAKASSGG SSPKMDVMKL LTTIHGLSEL LTLAHGSESS DSPEELHLIN STVQNLNMYI QNGIQERSVV
401: QHNSYDLQLL SNKSKLSIRD LQLPSTNNMT VDLGVRRKEK YSVVSGETFP DSGLYQYGVT KDEGFGQVVA KSGYQQNHQG EEQINPQSLF YKSLWLKAEA
501: ERCLMVYETS LSNPGS
001: MKHYSHGIDG LRSGLSPSAK PFAIGSSSSP AFSLKSEHED SIWGDYTLDL SFLSSDDQRS GLDDDDSLSN LSRDVETNKE GLVLEEKIAS SGKVLVNPNP
101: SFSKLPEVLM KSSDVVGDAK LGLSCVSEKS STESDLDESE EDSPCWKGML SHKSLASGTK SMTSRRSTDD LSGFRKLNPL APQFIPSSSK KKLETDGEKC
201: EETSSSSLKK SLSSTFPSSS GEFDLTDPPL EDGRNDAAEK TSILTHNADE ILGFVTSDSV SKTVSMLDSR NEFQPSKRLD PLAPVFVPSS AKLGPSVHEK
301: LGDFVVNAYS TSALASSHVK SLDKGKVVTS SGEVGHSFKS QYGGHDFGST SSYGPWIESE VGITEYAKLG SSNKSQGQRR LNPLARQFSL ADAKQKPYGY
401: GKNQAADDLS LVVNTSGLYI PARYREDHNV VDADLAQSSV NVERFLPNMS HGGSSLITPK ADSNFGSTKW IAVEPNPTFS VKGNRDFKHH LPFHVVETAA
501: SSSTSDMKAL PGPSPKMDVK KLLTTMHGLS ELLTLAHGSE SSDSPNAEEL DLINSTVQNL NLYIQNNSQE HAGNQSVAQY NSYDLKLLPN KSKLSIRDHQ
601: FPTANNMTVD LDVKRKDKYS VVSRETVPGS RSYQYGATED NGFGQVVPTN GYQQHQGVEQ INQNALFYKS LWLKAEADRC LMVYETSLSN PYP
101: SFSKLPEVLM KSSDVVGDAK LGLSCVSEKS STESDLDESE EDSPCWKGML SHKSLASGTK SMTSRRSTDD LSGFRKLNPL APQFIPSSSK KKLETDGEKC
201: EETSSSSLKK SLSSTFPSSS GEFDLTDPPL EDGRNDAAEK TSILTHNADE ILGFVTSDSV SKTVSMLDSR NEFQPSKRLD PLAPVFVPSS AKLGPSVHEK
301: LGDFVVNAYS TSALASSHVK SLDKGKVVTS SGEVGHSFKS QYGGHDFGST SSYGPWIESE VGITEYAKLG SSNKSQGQRR LNPLARQFSL ADAKQKPYGY
401: GKNQAADDLS LVVNTSGLYI PARYREDHNV VDADLAQSSV NVERFLPNMS HGGSSLITPK ADSNFGSTKW IAVEPNPTFS VKGNRDFKHH LPFHVVETAA
501: SSSTSDMKAL PGPSPKMDVK KLLTTMHGLS ELLTLAHGSE SSDSPNAEEL DLINSTVQNL NLYIQNNSQE HAGNQSVAQY NSYDLKLLPN KSKLSIRDHQ
601: FPTANNMTVD LDVKRKDKYS VVSRETVPGS RSYQYGATED NGFGQVVPTN GYQQHQGVEQ INQNALFYKS LWLKAEADRC LMVYETSLSN PYP
Arabidopsis Description
Uncharacterized protein At1g33050 [Source:UniProtKB/TrEMBL;Acc:Q8VYZ1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.