Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84053 | Canola | nucleus | 50.07 | 70.96 |
| Bra035480.1-P | Field mustard | nucleus | 52.09 | 69.96 |
| CDY44971 | Canola | nucleus | 51.52 | 69.32 |
| AT4G10470.1 | Thale cress | plastid | 26.7 | 47.68 |
Protein Annotations
| MapMan:35.2 | EntrezGene:840200 | ProteinID:AEE31554.1 | ProteinID:AEE31556.1 | ProteinID:ANM59906.1 | ArrayExpress:AT1G33050 |
| EnsemblPlantsGene:AT1G33050 | RefSeq:AT1G33050 | TAIR:AT1G33050 | RefSeq:AT1G33050-TAIR-G | EnsemblPlants:AT1G33050.4 | TAIR:AT1G33050.4 |
| EMBL:AY065436 | EMBL:AY117233 | Unigene:At.28625 | GO:GO:0008150 | RefSeq:NP_001185128.1 | RefSeq:NP_001319131.1 |
| RefSeq:NP_174581.1 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PANTHER:PTHR34361 | PANTHER:PTHR34361:SF2 | UniProt:Q8VYZ1 | UniParc:UPI00000A6AF9 | SEG:seg | : |
Description
Uncharacterized protein At1g33050 [Source:UniProtKB/TrEMBL;Acc:Q8VYZ1]
Coordinates
chr1:-:11967816..11971532
Molecular Weight (calculated)
75286.2 Da
IEP (calculated)
5.716
GRAVY (calculated)
-0.593
Length
693 amino acids
Sequence
(BLAST)
(BLAST)
001: MKHYSHGIDG LRSGLSPSAK PFAIGSSSSP AFSLKSEHED SIWGDYTLDL SFLSSDDQRS GLDDDDSLSN LSRDVETNKE GLVLEEKIAS SGKVLVNPNP
101: SFSKLPEVLM KSSDVVGDAK LGLSCVSEKS STESDLDESE EDSPCWKGML SHKSLASGTK SMTSRRSTDD LSGFRKLNPL APQFIPSSSK KKLETDGEKC
201: EETSSSSLKK SLSSTFPSSS GEFDLTDPPL EDGRNDAAEK TSILTHNADE ILGFVTSDSV SKTVSMLDSR NEFQPSKRLD PLAPVFVPSS AKLGPSVHEK
301: LGDFVVNAYS TSALASSHVK SLDKGKVVTS SGEVGHSFKS QYGGHDFGST SSYGPWIESE VGITEYAKLG SSNKSQGQRR LNPLARQFSL ADAKQKPYGY
401: GKNQAADDLS LVVNTSGLYI PARYREDHNV VDADLAQSSV NVERFLPNMS HGGSSLITPK ADSNFGSTKW IAVEPNPTFS VKGNRDFKHH LPFHVVETAA
501: SSSTSDMKAL PGPSPKMDVK KLLTTMHGLS ELLTLAHGSE SSDSPNAEEL DLINSTVQNL NLYIQNNSQE HAGNQSVAQY NSYDLKLLPN KSKLSIRDHQ
601: FPTANNMTVD LDVKRKDKYS VVSRETVPGS RSYQYGATED NGFGQVVPTN GYQQHQGVEQ INQNALFYKS LWLKAEADRC LMVYETSLSN PYP
101: SFSKLPEVLM KSSDVVGDAK LGLSCVSEKS STESDLDESE EDSPCWKGML SHKSLASGTK SMTSRRSTDD LSGFRKLNPL APQFIPSSSK KKLETDGEKC
201: EETSSSSLKK SLSSTFPSSS GEFDLTDPPL EDGRNDAAEK TSILTHNADE ILGFVTSDSV SKTVSMLDSR NEFQPSKRLD PLAPVFVPSS AKLGPSVHEK
301: LGDFVVNAYS TSALASSHVK SLDKGKVVTS SGEVGHSFKS QYGGHDFGST SSYGPWIESE VGITEYAKLG SSNKSQGQRR LNPLARQFSL ADAKQKPYGY
401: GKNQAADDLS LVVNTSGLYI PARYREDHNV VDADLAQSSV NVERFLPNMS HGGSSLITPK ADSNFGSTKW IAVEPNPTFS VKGNRDFKHH LPFHVVETAA
501: SSSTSDMKAL PGPSPKMDVK KLLTTMHGLS ELLTLAHGSE SSDSPNAEEL DLINSTVQNL NLYIQNNSQE HAGNQSVAQY NSYDLKLLPN KSKLSIRDHQ
601: FPTANNMTVD LDVKRKDKYS VVSRETVPGS RSYQYGATED NGFGQVVPTN GYQQHQGVEQ INQNALFYKS LWLKAEADRC LMVYETSLSN PYP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.