Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003394.1-P | Field mustard | plastid | 80.15 | 97.32 |
| CDX98398 | Canola | cytosol, peroxisome, plastid | 96.32 | 97.04 |
| AT3G59900.1 | Thale cress | plastid | 74.26 | 77.69 |
| CDY30454 | Canola | cytosol, peroxisome, plastid | 63.97 | 64.93 |
| CDY23416 | Canola | cytosol, peroxisome, plasma membrane | 63.24 | 64.18 |
| CDX79784 | Canola | plasma membrane | 50.74 | 63.3 |
| CDY17888 | Canola | plasma membrane | 50.0 | 62.39 |
| CDX83441 | Canola | cytosol, peroxisome, plasma membrane | 60.29 | 59.85 |
| CDX95587 | Canola | cytosol | 58.82 | 43.01 |
Protein Annotations
| EnsemblPlants:CDX67816 | EnsemblPlantsGene:GSBRNA2T00099013001 | GO:A0A078BSV3 | GO:GO:0008150 | GO:GO:0040007 | GO:GO:0046622 |
| InterPro:ARGOS/ARL | PANTHER:PTHR36023 | PANTHER:PTHR36023:SF3 | ProteinID:CDX67816 | ProteinID:CDX67816.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0004EEC5EC | MapMan:35.1 | : | : | : |
Description
BnaA07g18560D
Coordinates
chrLK031787:+:2378094..2378756
Molecular Weight (calculated)
15354.3 Da
IEP (calculated)
11.542
GRAVY (calculated)
0.132
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MIRKTPNLQN DIINIQERYS NNLVMDVGGG RNSRKNVNFR RPPPAMTSEN SKHELRRTFS SQKRLMIPAN YFSLESLFIL VGLTASLLIL PLVLPPLPPP
101: PFMLLLVPIG IMVLLIFLAF MPSSSSKAKD VTRTFM
101: PFMLLLVPIG IMVLLIFLAF MPSSSSKAKD VTRTFM
001: MIREISNLQK DIINIQDSYS NNRVMDVGRN NRKNMSFRSS PEKSKQELRR SFSAQKRMMI PANYFSLESL FLLVGLTASL LILPLVLPPL PPPPFMLLLV
101: PIGIMVLLVV LAFMPSSHSN ANTDVTCNFM
101: PIGIMVLLVV LAFMPSSHSN ANTDVTCNFM
Arabidopsis Description
ARGOSARGOS [Source:UniProtKB/TrEMBL;Acc:A0A178VK86]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.