Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 3
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51887 | Canola | cytosol | 97.35 | 99.25 |
| CDY65286 | Canola | nucleus | 10.16 | 95.24 |
| CDY67065 | Canola | cytosol | 3.95 | 90.91 |
| CDY66547 | Canola | cytosol | 18.75 | 88.3 |
| CDY68930 | Canola | nucleus | 8.81 | 87.15 |
| CDY35524 | Canola | cytosol | 21.01 | 84.55 |
| CDY19067 | Canola | extracellular, mitochondrion | 3.84 | 83.95 |
| CDX91499 | Canola | cytosol | 25.52 | 77.27 |
| CDX74881 | Canola | nucleus | 10.39 | 74.19 |
| Bra013431.1-P | Field mustard | cytosol | 99.15 | 74.12 |
| AT1G80070.1 | Thale cress | cytosol | 96.67 | 72.57 |
| CDY58771 | Canola | cytosol, golgi | 2.2 | 72.22 |
| CDX87291 | Canola | cytosol, golgi | 2.2 | 72.22 |
| CDX91500 | Canola | cytosol | 10.16 | 70.31 |
| CDX74882 | Canola | nucleus | 77.3 | 66.68 |
| CDX91498 | Canola | endoplasmic reticulum, golgi, plasma membrane | 52.23 | 63.14 |
| CDY47696 | Canola | endoplasmic reticulum, golgi | 50.99 | 61.72 |
| CDY57684 | Canola | cytosol | 1.75 | 58.49 |
| CDY16708 | Canola | nucleus | 2.71 | 55.17 |
| HORVU7Hr1G073700.1 | Barley | cytosol | 0.28 | 17.24 |
| CDY17826 | Canola | cytosol, nucleus, plastid | 0.17 | 3.06 |
Protein Annotations
| Gene3D:1.20.58.1750 | Gene3D:1.20.80.40 | MapMan:16.4.1.4.4 | Gene3D:3.30.420.230 | Gene3D:3.40.140.10 | Gene3D:3.90.1570.40 |
| GO:A0A078CP25 | EnsemblPlants:CDX78961 | ProteinID:CDX78961 | ProteinID:CDX78961.1 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0000398 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005681 |
| GO:GO:0006139 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0017070 |
| GO:GO:0030623 | GO:GO:0051082 | EnsemblPlantsGene:GSBRNA2T00131465001 | InterPro:IPR037518 | InterPro:JAMM/MPN+_dom | InterPro:MPN |
| PFAM:PD149576 | PFAM:PF01398 | PFAM:PF08082 | PFAM:PF08083 | PFAM:PF08084 | PFAM:PF10596 |
| PFAM:PF10597 | PFAM:PF12134 | InterPro:PRO8NT | InterPro:PROCN | InterPro:PROCT | InterPro:PRP8 |
| InterPro:PRP8_domainIV | PFscan:PS50249 | PANTHER:PTHR11140 | InterPro:Prp8_U5-snRNA-bd | InterPro:Prp8_U6-snRNA-bd | InterPro:RNaseH-like_sf |
| SMART:SM00232 | SUPFAM:SSF53098 | UniParc:UPI0004EE048E | SEG:seg | : | : |
Description
BnaA01g10280D
Coordinates
chrLK031816:-:1086070..1094980
Molecular Weight (calculated)
206244.0 Da
IEP (calculated)
8.295
GRAVY (calculated)
-0.513
Length
1771 amino acids
Sequence
(BLAST)
(BLAST)
0001: MWNNNDGMPL APPGTGVSMI PPPHPSYTSL PPPHPSNPTP PPVEPTPEEA EAKLEEKARK WMQLNSKRYG DKRKFGFVET QKEDMPPEHV RKIIRDHGDM
0101: SSKKFRHDKR VYLGALKFVP HAVFKLLENM PMPWEQVRDV KVLYHITGAI TFVNEIPWVV EPIYMAQWGT MWIMMRREKR DRRHFKRMRF PPFDDEEPPL
0201: DYADNLLDVD PLEPIQLELD EEEDSAVHTW FYDHKPLVKT KLINGPSYRK WNLSLPIMAT LHRLAGQLLS DLIDRNYFYL FDMPSFFTAK ALNMCIPGGP
0301: KFEPLYRDME KGDEDWNEFN DINKLIIRSP LRTEYRIGFP HLYNNRPRKV KLCVYHSPMV MYIKTEDPDL PAFYYDPLLH PISNTNKERR ERNVFEDDGE
0401: DEFILPEGVE PLLKDTHLYT DTTAAGISLL FAPRPFNMRS GRTRRSEDIP LVSEWFKEHC PPAYPVKVRV SYQKLLKCYV LNELHHRPPK AQKKKHLFRS
0501: LAATKFFQST ELDWVEVGLQ VCRQGYNMLN LLIHRKNLNY LHLDYNFNLK PHPDPNNENM VGYNNKKCWP RDARMRLMKH DVNLGRSVFW DMKNRLPRSI
0601: TTLEWENGFV SVYSKDNPNL LFSMCGFEVR ILPKIRMTQE AFSNTRDGVW NLQNEQTKER TAVAFLRVDD EHMKVFENRA RQILMSSGST TFTKIVNKWN
0701: TALIGLMTYF REATVHTQEL LDLLVKCENK IQTRIKIGLN SKMPSRFPPV IFYTPKEIGG LGMLSMGHIL IPQSDLRYSK QTDVGVTHFR SGMSHEEDQL
0801: IPNLYRYIQP WESEFIDSQR VWAEYALKRQ EAQAQNRRLT LEDLEDSWDR GIPRINTLFQ KDRHTLAYDK GWRVRTDFKQ YQVLKQNPFW WTHQRHDGKL
0901: WNLNNYRTDV IQALGGVEGI LEHTLFKGTY FPTWEGLFWE KASGFEESMK YKKLTNAQRS GLNQIPNRRF TLWWSPTINR ANVYVGFQVQ LDLTGIFMHG
1001: KIPTLKISLI QIFRAHLWQK IHESVVMDLC QVLDQELDAL EIETVQKETI HPRKSYKMNS SCADVLLFAA HKWPMSKPSL VAESKDVFDQ KASNKYWIDV
1101: QLRWGDYDSH DIERYTRAKF MDYTTDNMSI YPSPTGVMIG LDLAYNLHSA FGNWFPGSKP LLAQAMNKIM KSNPALYVLR ERIRKGLQLY SSEPTEPYLS
1201: SQNYGEIFSN QIIWFVDDTN VYRVTIHKTF EGNLTTKPIN GAIFIFNPRT GQLFLKVIHT SVWAGQKRLG QLAKWKTAEE VAALVRSLPV EEQPKQVIVT
1301: RKGMLDPLEV HLLDFPNIVI KGSELQLPFQ ACLKIEKFGD LILKATEPQM VLFNIYDDWL KSISSYTAFS RLILILRALH VNNEKAKMLL KPDKSVVTEP
1401: HHIWPSLTDD QWMKVEVALR DLILSDYAKK NNVNTSALTQ SEIRDIILGA EITPPSQQRQ QIAEIEKQAK EASQINAVTT RTTNVHGEEL IVTTVSPYEQ
1501: TAFGSKTDWR VRAISATNLY LRVNHIYVNS DDIKETGYTY IMPKNVLKKF ICIADLRTQI AGYLYGISPP DNPQVKEIRC VVMVPQWGSH QHLNLPSALP
1601: EHEFLNDLEP LGWLHTQPNE LPQLSPQDVT SHSRILENNK QWDGEKCIIL TCSFTPGSCS LTSYKLTQTG YEWGRLNKDT GGNPHGYLPT HYEKVQMLLS
1701: DRFLGFYMVP ENGPWNYNFM GVKHTVGMKY SVKLGTPKEY YHEEHRPTHF LEFSNMEEAD IAEGDREDTF A
0101: SSKKFRHDKR VYLGALKFVP HAVFKLLENM PMPWEQVRDV KVLYHITGAI TFVNEIPWVV EPIYMAQWGT MWIMMRREKR DRRHFKRMRF PPFDDEEPPL
0201: DYADNLLDVD PLEPIQLELD EEEDSAVHTW FYDHKPLVKT KLINGPSYRK WNLSLPIMAT LHRLAGQLLS DLIDRNYFYL FDMPSFFTAK ALNMCIPGGP
0301: KFEPLYRDME KGDEDWNEFN DINKLIIRSP LRTEYRIGFP HLYNNRPRKV KLCVYHSPMV MYIKTEDPDL PAFYYDPLLH PISNTNKERR ERNVFEDDGE
0401: DEFILPEGVE PLLKDTHLYT DTTAAGISLL FAPRPFNMRS GRTRRSEDIP LVSEWFKEHC PPAYPVKVRV SYQKLLKCYV LNELHHRPPK AQKKKHLFRS
0501: LAATKFFQST ELDWVEVGLQ VCRQGYNMLN LLIHRKNLNY LHLDYNFNLK PHPDPNNENM VGYNNKKCWP RDARMRLMKH DVNLGRSVFW DMKNRLPRSI
0601: TTLEWENGFV SVYSKDNPNL LFSMCGFEVR ILPKIRMTQE AFSNTRDGVW NLQNEQTKER TAVAFLRVDD EHMKVFENRA RQILMSSGST TFTKIVNKWN
0701: TALIGLMTYF REATVHTQEL LDLLVKCENK IQTRIKIGLN SKMPSRFPPV IFYTPKEIGG LGMLSMGHIL IPQSDLRYSK QTDVGVTHFR SGMSHEEDQL
0801: IPNLYRYIQP WESEFIDSQR VWAEYALKRQ EAQAQNRRLT LEDLEDSWDR GIPRINTLFQ KDRHTLAYDK GWRVRTDFKQ YQVLKQNPFW WTHQRHDGKL
0901: WNLNNYRTDV IQALGGVEGI LEHTLFKGTY FPTWEGLFWE KASGFEESMK YKKLTNAQRS GLNQIPNRRF TLWWSPTINR ANVYVGFQVQ LDLTGIFMHG
1001: KIPTLKISLI QIFRAHLWQK IHESVVMDLC QVLDQELDAL EIETVQKETI HPRKSYKMNS SCADVLLFAA HKWPMSKPSL VAESKDVFDQ KASNKYWIDV
1101: QLRWGDYDSH DIERYTRAKF MDYTTDNMSI YPSPTGVMIG LDLAYNLHSA FGNWFPGSKP LLAQAMNKIM KSNPALYVLR ERIRKGLQLY SSEPTEPYLS
1201: SQNYGEIFSN QIIWFVDDTN VYRVTIHKTF EGNLTTKPIN GAIFIFNPRT GQLFLKVIHT SVWAGQKRLG QLAKWKTAEE VAALVRSLPV EEQPKQVIVT
1301: RKGMLDPLEV HLLDFPNIVI KGSELQLPFQ ACLKIEKFGD LILKATEPQM VLFNIYDDWL KSISSYTAFS RLILILRALH VNNEKAKMLL KPDKSVVTEP
1401: HHIWPSLTDD QWMKVEVALR DLILSDYAKK NNVNTSALTQ SEIRDIILGA EITPPSQQRQ QIAEIEKQAK EASQINAVTT RTTNVHGEEL IVTTVSPYEQ
1501: TAFGSKTDWR VRAISATNLY LRVNHIYVNS DDIKETGYTY IMPKNVLKKF ICIADLRTQI AGYLYGISPP DNPQVKEIRC VVMVPQWGSH QHLNLPSALP
1601: EHEFLNDLEP LGWLHTQPNE LPQLSPQDVT SHSRILENNK QWDGEKCIIL TCSFTPGSCS LTSYKLTQTG YEWGRLNKDT GGNPHGYLPT HYEKVQMLLS
1701: DRFLGFYMVP ENGPWNYNFM GVKHTVGMKY SVKLGTPKEY YHEEHRPTHF LEFSNMEEAD IAEGDREDTF A
0001: MWNNNDGMPL APPGTGGSMM PPPPAAHPSY TALPPPSNPT PPVEPTPEEA EAKLEEKARK WMQLNSKRYG DKRKFGFVET QKEDMPPEHV RKIIRDHGDM
0101: SSKKFRHDKR VYLGALKFVP HAVFKLLENM PMPWEQVRDV KVLYHITGAI TFVNEIPWVV EPIYMAQWGT MWIMMRREKR DRRHFKRMRF PPFDDEEPPL
0201: DYADNLLDVD PLEPIQLELD EEEDSAVHTW FYDHKPLVKT KLINGPSYRR WNLSLPIMAT LHRLAGQLLS DLIDRNYFYL FDMPSFFTAK ALNMCIPGGP
0301: KFEPLYRDME KGDEDWNEFN DINKLIIRSP LRTEYRIAFP HLYNNRPRKV KLCVYHSPMI MYIKTEDPDL PAFYYDPLIH PISNTNKEKR ERKVYDDEDD
0401: FALPEGVEPL LRDTQLYTDT TAAGISLLFA PRPFNMRSGR TRRAEDIPLV SEWFKEHCPP AYPVKVRVSY QKLLKCYVLN ELHHRPPKAQ KKKHLFRSLA
0501: ATKFFQSTEL DWVEVGLQVC RQGYNMLNLL IHRKNLNYLH LDYNFNLKPV KTLTTKERKK SRFGNAFHLC REILRLTKLV VDANVQFRLG NVDAFQLADG
0601: LQYIFSHVGQ LTGMYRYKYR LMRQIRMCKD LKHLIYYRFN TGPVGKGPGC GFWAPMWRVW LFFLRGIVPL LERWLGNLLA RQFEGRHSKG VAKTVTKQRV
0701: ESHFDLELRA AVMHDVLDAM PEGIKQNKAR TILQHLSEAW RCWKANIPWK VPGLPVPIEN MILRYVKSKA DWWTNVAHYN RERIRRGATV DKTVCRKNLG
0801: RLTRLWLKAE QERQHNYLKD GPYVTPEEAL AIYTTTVHWL ESRKFSPIPF PPLSYKHDTK LLILALERLK ESYSVAVRLN QQQREELGLI EQAYDNPHEA
0901: LSRIKRHLLT QRGFKEVGIE FMDLYSYLIP VYEIEPLEKI TDAYLDQYLW YEGDKRHLFP NWIKPADSEP PPLLVYKWCQ GINNLQGIWD TGDGQCVVML
1001: QTKFEKFFEK IDLTMLNRLL RLVLDHNIAD YVSAKNNVVL SYKDMSHTNS YGLIRGLQFA SFVVQFYGLL LDLLLLGLTR ASEIAGPPQM PNEFMTFWDT
1101: KVETRHPIRL YSRYIDKVHI MFKFTHEEAR DLIQRYLTEH PDPNNENMVG YNNKKCWPRD ARMRLMKHDV NLGRSVFWDM KNRLPRSITT LEWENGFVSV
1201: YSKDNPNLLF SMCGFEVRIL PKIRMTQEAF SNTKDGVWNL QNEQTKERTA VAFLRVDDEH MKVFENRVRQ ILMSSGSTTF TKIVNKWNTA LIGLMTYFRE
1301: ATVHTQELLD LLVKCENKIQ TRIKIGLNSK MPSRFPPVIF YTPKEIGGLG MLSMGHILIP QSDLRYSKQT DVGVTHFRSG MSHEEDQLIP NLYRYIQPWE
1401: SEFIDSQRVW AEYALKRQEA QAQNRRLTLE DLEDSWDRGI PRINTLFQKD RHTLAYDKGW RVRTDFKQYQ VLKQNPFWWT HQRHDGKLWN LNNYRTDVIQ
1501: ALGGVEGILE HTLFKGTYFP TWEGLFWEKA SGFEESMKYK KLTNAQRSGL NQIPNRRFTL WWSPTINRAN VYVGFQVQLD LTGIFMHGKI PTLKISLIQI
1601: FRAHLWQKIH ESVVMDLCQV LDQELDALEI ETVQKETIHP RKSYKMNSSC ADVLLFAAHK WPMSKPSLVA ESKDMFDQKA SNKYWIDVQL RWGDYDSHDI
1701: ERYTRAKFMD YTTDNMSIYP SPTGVMIGLD LAYNLHSAFG NWFPGSKPLL AQAMNKIMKS NPALYVLRER IRKGLQLYSS EPTEPYLSSQ NYGEIFSNQI
1801: IWFVDDTNVY RVTIHKTFEG NLTTKPINGA IFIFNPRTGQ LFLKVIHTSV WAGQKRLGQL AKWKTAEEVA ALVRSLPVEE QPKQIIVTRK GMLDPLEVHL
1901: LDFPNIVIKG SELQLPFQAC LKIEKFGDLI LKATEPQMVL FNIYDDWLKS ISSYTAFSRL ILILRALHVN NEKAKMLLKP DKSVVTEPHH IWPSLTDDQW
2001: MKVEVALRDL ILSDYAKKNN VNTSALTQSE IRDIILGAEI TPPSQQRQQI AEIEKQAKEA SQLTAVTTRT TNVHGDELIV TTTSPYEQSA FGSKTDWRVR
2101: AISATNLYLR VNHIYVNSDD IKETGYTYIM PKNILKKFIC VADLRTQIAG YLYGISPPDN PQVKEIRCVV MVPQWGNHQL VHLPSSLPEH DFLNDLEPLG
2201: WLHTQPNELP QLSPQDVTSH SRILENNKQW DGEKCIILTC SFTPGSCSLT SYKLTQTGYE WGRLNKDNGS NPHGYLPTHY EKVQMLLSDR FLGFYMVPES
2301: GPWNYSFTGV KHTLSMKYSV KLGSPKEFYH EEHRPTHFLE FSNMEEADIT EGDREDTFT
0101: SSKKFRHDKR VYLGALKFVP HAVFKLLENM PMPWEQVRDV KVLYHITGAI TFVNEIPWVV EPIYMAQWGT MWIMMRREKR DRRHFKRMRF PPFDDEEPPL
0201: DYADNLLDVD PLEPIQLELD EEEDSAVHTW FYDHKPLVKT KLINGPSYRR WNLSLPIMAT LHRLAGQLLS DLIDRNYFYL FDMPSFFTAK ALNMCIPGGP
0301: KFEPLYRDME KGDEDWNEFN DINKLIIRSP LRTEYRIAFP HLYNNRPRKV KLCVYHSPMI MYIKTEDPDL PAFYYDPLIH PISNTNKEKR ERKVYDDEDD
0401: FALPEGVEPL LRDTQLYTDT TAAGISLLFA PRPFNMRSGR TRRAEDIPLV SEWFKEHCPP AYPVKVRVSY QKLLKCYVLN ELHHRPPKAQ KKKHLFRSLA
0501: ATKFFQSTEL DWVEVGLQVC RQGYNMLNLL IHRKNLNYLH LDYNFNLKPV KTLTTKERKK SRFGNAFHLC REILRLTKLV VDANVQFRLG NVDAFQLADG
0601: LQYIFSHVGQ LTGMYRYKYR LMRQIRMCKD LKHLIYYRFN TGPVGKGPGC GFWAPMWRVW LFFLRGIVPL LERWLGNLLA RQFEGRHSKG VAKTVTKQRV
0701: ESHFDLELRA AVMHDVLDAM PEGIKQNKAR TILQHLSEAW RCWKANIPWK VPGLPVPIEN MILRYVKSKA DWWTNVAHYN RERIRRGATV DKTVCRKNLG
0801: RLTRLWLKAE QERQHNYLKD GPYVTPEEAL AIYTTTVHWL ESRKFSPIPF PPLSYKHDTK LLILALERLK ESYSVAVRLN QQQREELGLI EQAYDNPHEA
0901: LSRIKRHLLT QRGFKEVGIE FMDLYSYLIP VYEIEPLEKI TDAYLDQYLW YEGDKRHLFP NWIKPADSEP PPLLVYKWCQ GINNLQGIWD TGDGQCVVML
1001: QTKFEKFFEK IDLTMLNRLL RLVLDHNIAD YVSAKNNVVL SYKDMSHTNS YGLIRGLQFA SFVVQFYGLL LDLLLLGLTR ASEIAGPPQM PNEFMTFWDT
1101: KVETRHPIRL YSRYIDKVHI MFKFTHEEAR DLIQRYLTEH PDPNNENMVG YNNKKCWPRD ARMRLMKHDV NLGRSVFWDM KNRLPRSITT LEWENGFVSV
1201: YSKDNPNLLF SMCGFEVRIL PKIRMTQEAF SNTKDGVWNL QNEQTKERTA VAFLRVDDEH MKVFENRVRQ ILMSSGSTTF TKIVNKWNTA LIGLMTYFRE
1301: ATVHTQELLD LLVKCENKIQ TRIKIGLNSK MPSRFPPVIF YTPKEIGGLG MLSMGHILIP QSDLRYSKQT DVGVTHFRSG MSHEEDQLIP NLYRYIQPWE
1401: SEFIDSQRVW AEYALKRQEA QAQNRRLTLE DLEDSWDRGI PRINTLFQKD RHTLAYDKGW RVRTDFKQYQ VLKQNPFWWT HQRHDGKLWN LNNYRTDVIQ
1501: ALGGVEGILE HTLFKGTYFP TWEGLFWEKA SGFEESMKYK KLTNAQRSGL NQIPNRRFTL WWSPTINRAN VYVGFQVQLD LTGIFMHGKI PTLKISLIQI
1601: FRAHLWQKIH ESVVMDLCQV LDQELDALEI ETVQKETIHP RKSYKMNSSC ADVLLFAAHK WPMSKPSLVA ESKDMFDQKA SNKYWIDVQL RWGDYDSHDI
1701: ERYTRAKFMD YTTDNMSIYP SPTGVMIGLD LAYNLHSAFG NWFPGSKPLL AQAMNKIMKS NPALYVLRER IRKGLQLYSS EPTEPYLSSQ NYGEIFSNQI
1801: IWFVDDTNVY RVTIHKTFEG NLTTKPINGA IFIFNPRTGQ LFLKVIHTSV WAGQKRLGQL AKWKTAEEVA ALVRSLPVEE QPKQIIVTRK GMLDPLEVHL
1901: LDFPNIVIKG SELQLPFQAC LKIEKFGDLI LKATEPQMVL FNIYDDWLKS ISSYTAFSRL ILILRALHVN NEKAKMLLKP DKSVVTEPHH IWPSLTDDQW
2001: MKVEVALRDL ILSDYAKKNN VNTSALTQSE IRDIILGAEI TPPSQQRQQI AEIEKQAKEA SQLTAVTTRT TNVHGDELIV TTTSPYEQSA FGSKTDWRVR
2101: AISATNLYLR VNHIYVNSDD IKETGYTYIM PKNILKKFIC VADLRTQIAG YLYGISPPDN PQVKEIRCVV MVPQWGNHQL VHLPSSLPEH DFLNDLEPLG
2201: WLHTQPNELP QLSPQDVTSH SRILENNKQW DGEKCIILTC SFTPGSCSLT SYKLTQTGYE WGRLNKDNGS NPHGYLPTHY EKVQMLLSDR FLGFYMVPES
2301: GPWNYSFTGV KHTLSMKYSV KLGSPKEFYH EEHRPTHFLE FSNMEEADIT EGDREDTFT
Arabidopsis Description
PRP8ASUS2 [Source:UniProtKB/TrEMBL;Acc:A0A178W7J7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.